RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 CAPN3P20807 821 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 PTGER1P34995 402 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 POLD2P49005 469 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 CLCN5P51795 746 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 CDH12P55289 794 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 SLC18A2Q05940 514 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 KRTAP1-1Q07627 177 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 PKP1Q13835 747 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 CAPSQ13938 189 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 HIST2H2ACQ16777 129 aaPredicted RBP4.33□□□□□ -1.72
SDHB-204ENST00000475049 CCDC142Q17RM4 750 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 ATG9BQ674R7 924 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 NUGGCQ68CJ6 796 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 CPLX2Q6PUV4 134 aaKnown RBP4.33□□□□□ -1.72
SDHB-204ENST00000475049 FAM83HQ6ZRV2 1179 aaPredicted RBP4.33□□□□□ -1.72
SDHB-204ENST00000475049 SLC16A12Q6ZSM3 486 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 SLC46A3Q7Z3Q1 461 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 MMP21Q8N119 569 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 CADM3Q8N126 398 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 ZNF548Q8NEK5 533 aaPredicted RBP4.33□□□□□ -1.72
SDHB-204ENST00000475049 ZMIZ2Q8NF64 920 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 CADM4Q8NFZ8 388 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 TMEM170AQ8WVE7 144 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 SLC25A28Q96A46 364 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 MSI2Q96DH6 328 aaKnown RBP4.33□□□□□ -1.72
SDHB-204ENST00000475049 NR1H4Q96RI1 486 aaPredicted RBP4.33□□□□□ -1.72
SDHB-204ENST00000475049 SIN3AQ96ST3 1273 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 YME1L1Q96TA2 773 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 POLDIP3Q9BY77 421 aaKnown RBP4.33□□□□□ -1.72
SDHB-204ENST00000475049 RANBP17Q9H2T7 1088 aaKnown RBP4.33□□□□□ -1.72
SDHB-204ENST00000475049 MAP6D1Q9H9H5 199 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 SPATS2LQ9NUQ6 558 aaKnown RBP4.33□□□□□ -1.72
SDHB-204ENST00000475049 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.33□□□□□ -1.72
SDHB-204ENST00000475049 FAM96BQ9Y3D0 163 aa4.33□□□□□ -1.72
SDHB-204ENST00000475049 KDM3AQ9Y4C1 1321 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 PGPEP1LA6NFU8 196 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 DNAJC9-AS1A6NH13 148 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 LRRC53A6NM62 1247 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 H0YGN5 161 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 MDM4O15151 490 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 ATG13O75143 517 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 TMEM191BP0C7N4 346 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 MYZAPP0CAP1 466 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 EDN2P20800 178 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 CPOXP36551 454 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 RXRGP48443 463 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 PPP3CCP48454 512 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 CENPAP49450 140 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 GNAQP50148 359 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 HDAC4P56524 1084 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 RPS3AP61247 264 aaKnown RBP4.32□□□□□ -1.72
SDHB-204ENST00000475049 SSBP2P81877 361 aaPredicted RBP4.32□□□□□ -1.72
SDHB-204ENST00000475049 SETQ01105 290 aaPredicted RBP4.32□□□□□ -1.72
SDHB-204ENST00000475049 PTGR1Q14914 329 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 GSTA3Q16772 222 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 PRTGQ2VWP7 1150 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 EPHA10Q5JZY3 1008 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 WASHC2DQ5SRD0 308 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 HYIQ5T013 277 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 TMEM71Q6P5X7 295 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 TMTC3Q6ZXV5 915 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 TDRPQ86YL5 185 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 KDM1BQ8NB78 822 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 ADAMTS15Q8TE58 950 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 SLC35F5Q8WV83 523 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 SMARCE1Q969G3 411 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 GFM1Q96RP9 751 aaKnown RBP4.32□□□□□ -1.72
SDHB-204ENST00000475049 PIP5K1AQ99755 562 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 H2AFJQ9BTM1 129 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 ISCUQ9H1K1 167 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 CDT1Q9H211 546 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 DIAPH3Q9NSV4 1193 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 POT1Q9NUX5 634 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 ELOVL5Q9NYP7 299 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 CARD8Q9Y2G2 431 aa4.32□□□□□ -1.72
SDHB-204ENST00000475049 LAS1LQ9Y4W2 734 aaKnown RBP4.32□□□□□ -1.72
SDHB-204ENST00000475049 IGLV5-39A0A0G2JS06 123 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 GAGE12JA6NER3 117 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 NPIPB15A6NHN6 443 aaPredicted RBP4.31□□□□□ -1.72
SDHB-204ENST00000475049 CBY3A6NI87 242 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 EBAG9O00559 213 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 PPEF2O14830 753 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 LDLRAD4O15165 306 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 HNRNPCL1O60812 293 aaKnown RBP4.31□□□□□ -1.72
SDHB-204ENST00000475049 SEC14L2O76054 403 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 SEC31AO94979 1220 aaKnown RBP4.31□□□□□ -1.72
SDHB-204ENST00000475049 CCNDBP1O95273 360 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 CLDN7O95471 211 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 IFNA2P01563 188 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 KLKB1P03952 638 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 CLEC3BP05452 202 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 HEXAP06865 529 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 CBSLP0DN79 551 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 CHRNB2P17787 502 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 FBLP22087 321 aaKnown RBP4.31□□□□□ -1.72
SDHB-204ENST00000475049 NFKBIAP25963 317 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 CBSP35520 551 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 ARL3P36405 182 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 RGS2P41220 211 aa4.31□□□□□ -1.72
SDHB-204ENST00000475049 CASP2P42575 452 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms