RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 OLIG2Q13516 323 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 PTPRRQ15256 657 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 ACCSLQ4AC99 568 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 ARSIQ5FYB1 569 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 ANKRD20A2Q5SQ80 823 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 ANKRD20A1Q5TYW2 823 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 ANKRD20A3Q5VUR7 823 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 KCTD11Q693B1 232 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 DARS2Q6PI48 645 aaKnown RBP10.49□□□□□ -0.73
CASC3-204ENST00000474190 TSSK4Q6SA08 328 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 NUDT18Q6ZVK8 323 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 TRMT11Q7Z4G4 463 aaKnown RBP10.49□□□□□ -0.73
CASC3-204ENST00000474190 SRLQ86TD4 932 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 ZNF354CQ86Y25 554 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 CAMK1DQ8IU85 385 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 C1orf210Q8IVY1 113 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 FRMD1Q8N878 549 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 TMIEQ8NEW7 156 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 SPATA22Q8NHS9 363 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 AGAP3Q96P47 875 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 FCRL5Q96RD9 977 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 SEMA3CQ99985 751 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 HEPHQ9BQS7 1158 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 CINPQ9BW66 212 aaPredicted RBP10.49□□□□□ -0.73
CASC3-204ENST00000474190 CPEB1Q9BZB8 566 aaKnown RBP10.49□□□□□ -0.73
CASC3-204ENST00000474190 DDX47Q9H0S4 455 aaKnown RBP10.49□□□□□ -0.73
CASC3-204ENST00000474190 SLC25A51Q9H1U9 297 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 SEPT10Q9P0V9 454 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 USP36Q9P275 1121 aaKnown RBP10.49□□□□□ -0.73
CASC3-204ENST00000474190 RNF14Q9UBS8 474 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 SUN2Q9UH99 717 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 PCYOX1Q9UHG3 505 aa10.49□□□□□ -0.73
CASC3-204ENST00000474190 WDR87Q6ZQQ6 2873 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 CKAP5Q14008 2032 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 TCRBV21S2A2A0A5A6 115 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 F5H423 210 aaPredicted RBP10.48□□□□□ -0.73
CASC3-204ENST00000474190 KIF2AO00139 706 aaPredicted RBP10.48□□□□□ -0.73
CASC3-204ENST00000474190 MID1O15344 667 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 POP4O95707 220 aaKnown RBP10.48□□□□□ -0.73
CASC3-204ENST00000474190 MT-CYBP00156 380 aaPredicted RBP10.48□□□□□ -0.73
CASC3-204ENST00000474190 IGLV3-19P01714 112 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 PDHA1P08559 390 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 ATXN1LP0C7T5 689 aaKnown RBP10.48□□□□□ -0.73
CASC3-204ENST00000474190 ATXN8OSP0DMR3 200 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 TIMP2P16035 220 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 ITIH2P19823 946 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 PSMB4P28070 264 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 HSPA9P38646 679 aaKnown RBP10.48□□□□□ -0.73
CASC3-204ENST00000474190 ABL2P42684 1182 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 CXCL12P48061 93 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 FNTAP49354 379 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 SCNN1BP51168 640 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 DGKEP52429 567 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 MRPS25P82663 173 aaKnown RBP10.48□□□□□ -0.73
CASC3-204ENST00000474190 MAP7D1Q3KQU3 841 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 PIP5KL1Q5T9C9 394 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 CCDC181Q5TID7 509 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 AGBL4Q5VU57 503 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 HEATR6Q6AI08 1181 aaKnown RBP10.48□□□□□ -0.73
CASC3-204ENST00000474190 DENND5AQ6IQ26 1287 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 METTL3Q86U44 580 aaKnown RBP10.48□□□□□ -0.73
CASC3-204ENST00000474190 TMPRSS6Q8IU80 811 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 MMAAQ8IVH4 418 aaKnown RBP10.48□□□□□ -0.73
CASC3-204ENST00000474190 CCDC26Q8TAB7 109 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 PIP4K2CQ8TBX8 421 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 PIH1D2Q8WWB5 315 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 MAIP1Q8WWC4 291 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 MAGOHBQ96A72 148 aaKnown RBP10.48□□□□□ -0.73
CASC3-204ENST00000474190 MRGPRX2Q96LB1 330 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 GDAP1L1Q96MZ0 367 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 RBM15Q96T37 977 aaKnown RBP eCLIP10.48□□□□□ -0.73
CASC3-204ENST00000474190 VAT1Q99536 393 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 GBA3Q9H227 469 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 PCDHGC4Q9Y5F7 938 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 ATG2BQ96BY7 2078 aa10.48□□□□□ -0.73
CASC3-204ENST00000474190 LOC285095A0A1B0GVY8 99 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 CFAP69A5D8W1 941 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 MTSS1O43312 755 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 BNIP3LO60238 219 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 OPHN1O60890 802 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 ATG13O75143 517 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 URI1O94763 535 aaPredicted RBP10.47□□□□□ -0.73
CASC3-204ENST00000474190 UGT2B4P06133 528 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 GM2AP17900 193 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 STIP1P31948 543 aaKnown RBP10.47□□□□□ -0.73
CASC3-204ENST00000474190 NNMTP40261 264 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 CD86P42081 329 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 MAGEA6P43360 314 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 AP1S1P61966 158 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 SNRPD1P62314 119 aaKnown RBP10.47□□□□□ -0.73
CASC3-204ENST00000474190 C2orf54Q08AI8 447 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 ZNF235Q14590 738 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 CST6Q15828 149 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 SLC14A2Q15849 920 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 CDKN3Q16667 212 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 WHAMMP3Q1A5X7 153 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 P3H1Q32P28 736 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 POM121L1PQ3SYA9 428 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 RALGPS1Q5JS13 557 aa10.47□□□□□ -0.73
CASC3-204ENST00000474190 ANO7Q6IWH7 933 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms