RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 NPC1O15118 1278 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 SUN1O94901 812 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 FGF1P05230 155 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 FAM153BP0C7A2 387 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 PAMP19021 973 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 CTSOP43234 321 aaPredicted RBP10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 SLC6A11P48066 632 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 CSNK1DP48730 415 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 FAM193AP78312 1265 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 CDK18Q07002 472 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 GRSF1Q12849 480 aaKnown RBP eCLIP10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 CYTH1Q15438 398 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 DLG2Q15700 870 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 FAM153CQ494X1 144 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 HSP90B2PQ58FF3 399 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 CARD16Q5EG05 197 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 ATXN7L2Q5T6C5 722 aaPredicted RBP10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 ARMC12Q5T9G4 340 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 ALG1LQ6GMV1 187 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 CAPN12Q6ZSI9 719 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 TRMT11Q7Z4G4 463 aaKnown RBP10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 CROCCP2Q86T23 111 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 ADIPOR2Q86V24 386 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 C12orf40Q86WS4 652 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 RALGPS2Q86X27 583 aaPredicted RBP10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 ANKMY2Q8IV38 441 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 SLC25A41Q8N5S1 370 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 FBXO36Q8NEA4 188 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 OR52K1Q8NGK4 314 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 CYB5D2Q8WUJ1 264 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 STAMBPL1Q96FJ0 436 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 CFAP36Q96G28 342 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 MYO19Q96H55 970 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 OXNAD1Q96HP4 312 aaPredicted RBP10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 FEM1CQ96JP0 617 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 TUBGCP5Q96RT8 1024 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 APOL2Q9BQE5 337 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 IL22Q9GZX6 179 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 CDC42EP4Q9H3Q1 356 aaKnown RBP10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 DYRK4Q9NR20 520 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 THEGQ9P2T0 379 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 HECAQ9UBI9 543 aaPredicted RBP10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 LHX3Q9UBR4 397 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 ZC3H7BQ9UGR2 993 aaKnown RBP10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 FBXO10Q9UK96 956 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 INTS6Q9UL03 887 aaKnown RBP10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 IKBKGQ9Y6K9 419 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 PIAS3Q9Y6X2 628 aa10.39□□□□□ -0.75
PRPF38A-202ENST00000474048 A0A087WUV0 522 aaPredicted RBP10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 EDDM13A0A1B0GTR0 161 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 TCRBV7S3A2A0A539 114 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 MAGEB16A2A368 324 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 SPECC1L-ADORA2AF8WAN1 911 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 K7ERQ8 282 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 ATP9BO43861 1147 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 SYNCRIPO60506 623 aaKnown RBP10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 RNASEH1O60930 286 aaKnown RBP10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 SOCS5O75159 536 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 USP12O75317 370 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 ACSL3O95573 720 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 POP4O95707 220 aaKnown RBP10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 TTC4O95801 387 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 NDST3O95803 873 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 MT-CO1P00395 513 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 POLBP06746 335 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 CISD3P0C7P0 127 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 GLULP15104 373 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 PGAM1P18669 254 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 MGAT1P26572 445 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 ECHS1P30084 290 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 STX2P32856 288 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 EIF3BP55884 814 aaKnown RBP10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 POLR2LP62875 67 aaKnown RBP10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 SKOR1P84550 965 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 MTM1Q13496 603 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 TDGQ13569 410 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 CASP8Q14790 479 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 STARD3Q14849 445 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 HP1BP3Q5SSJ5 553 aaPredicted RBP10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 BEND6Q5SZJ8 279 aaPredicted RBP10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 ASTLQ6HA08 431 aaPredicted RBP10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 Q6ZVU0 165 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 KIAA0907Q7Z7F0 614 aaPredicted RBP10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 CHPFQ8IZ52 775 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 PGBD5Q8N414 524 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 SLC44A3Q8N4M1 653 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 MREGQ8N565 214 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 KDM1BQ8NB78 822 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 LPCAT1Q8NF37 534 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 OR8D1Q8WZ84 308 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 CDKL2Q92772 493 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 PPP1R16AQ96I34 528 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 PKNOX2Q96KN3 472 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 C9orf72Q96LT7 481 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 SRPK1Q96SB4 655 aaKnown RBP10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 RPP25Q9BUL9 199 aaKnown RBP10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 MLPHQ9BV36 600 aaPredicted RBP10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 OSBPL1AQ9BXW6 950 aa10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 PABPC3Q9H361 631 aaKnown RBP10.38□□□□□ -0.75
PRPF38A-202ENST00000474048 NOD2Q9HC29 1040 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms