RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 SBF1O95248 1867 aa5.21□□□□□ -1.57
TMEM39A-206ENST00000473684 A0A1B0GUL6 1792 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 SIPA1L3O60292 1781 aaPredicted RBP5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 ESYT2A0FGR8 921 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 WDR91A4D1P6 747 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 C2orf71A6NGG8 1288 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 LRRIQ4A6NIV6 560 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 FAM170BA6NMN3 283 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 F8W810 466 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 CLPXO76031 633 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 KRT7P08729 469 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 CDH1P12830 882 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 ICAM2P13598 275 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 NR4A2P43354 598 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 HCAR3P49019 387 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 COPZ1P61923 177 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 RHAGQ02094 409 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 CAV1Q03135 178 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 SCRN3Q0VDG4 424 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 GALNT2Q10471 571 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 RAPGEF1Q13905 1077 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 CCNIQ14094 377 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 UBE4AQ14139 1066 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 GALNT3Q14435 633 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 CDK10Q15131 360 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 ZBTB41Q5SVQ8 909 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 PKN3Q6P5Z2 889 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 PLEKHG7Q6ZR37 379 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 CHST3Q7LGC8 479 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 GSTA5Q7RTV2 222 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 TRABD2AQ86V40 505 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 CHERPQ8IWX8 916 aaKnown RBP5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 LINC00518Q8N0U6 118 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 DTX3Q8N9I9 347 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 GIMAP8Q8ND71 665 aaPredicted RBP5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 NCOA7Q8NI08 942 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 TOE1Q96GM8 510 aaKnown RBP5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 TSNARE1Q96NA8 513 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 C17orf62Q9BQA9 187 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 CLSTN3Q9BQT9 956 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 TMEM79Q9BSE2 394 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 CCDC8Q9H0W5 538 aaPredicted RBP5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 BLZF1Q9H2G9 400 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 MAGEE1Q9HCI5 957 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 TXNDC16Q9P2K2 825 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 ZC3H7BQ9UGR2 993 aaKnown RBP5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 SORCS3Q9UPU3 1222 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 TMEM5Q9Y2B1 443 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 PCDHA3Q9Y5H8 950 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 A0A0G2JND7 137 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 TRPC5OSA6NMA1 111 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 C16orf96A6NNT2 1141 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 C1QTNF9BB2RNN3 333 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 AQP7O14520 342 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 ACSL3O95573 720 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 CD4P01730 458 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 RETP07949 1114 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 ABHD2P08910 425 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 HSPD1P10809 573 aaKnown RBP5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 NCAM1P13591 858 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 KRT10P13645 584 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 IFNGR1P15260 489 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 HPCAL1P37235 193 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 GPR85P60893 370 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 GHRHRQ02643 423 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 TRPC3Q13507 836 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 BRDTQ58F21 947 aaPredicted RBP5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 UGT3A1Q6NUS8 523 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 ZFP1Q6P2D0 407 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 RSPO2Q6UXX9 243 aaPredicted RBP5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 MRPL10Q7Z7H8 261 aaKnown RBP5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 RALYLQ86SE5 291 aaKnown RBP5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 NT5DC3Q86UY8 548 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 TDRPQ86YL5 185 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 HERC6Q8IVU3 1022 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 UNC45BQ8IWX7 931 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 PPIL6Q8IXY8 311 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 ADGRG5Q8IZF4 528 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 KBTBD3Q8NAB2 608 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 APPL2Q8NEU8 664 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 SEPT1Q8WYJ6 367 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 GLG1Q92896 1179 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 DACT3Q96B18 629 aaPredicted RBP5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 CEP95Q96GE4 821 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 TNIP3Q96KP6 325 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 EFHD1Q9BUP0 239 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 TMEM120AQ9BXJ8 343 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 FOXP3Q9BZS1 431 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 PARVAQ9NVD7 372 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 FNIP2Q9P278 1114 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 TMEFF2Q9UIK5 374 aaPredicted RBP5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 AMFRQ9UKV5 643 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 SNX7Q9UNH6 387 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 CAB39Q9Y376 341 aaPredicted RBP5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 U3KQE9 123 aa5.21□□□□□ -1.58
TMEM39A-206ENST00000473684 BCORQ6W2J9 1755 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 A0A1W2PPW3 197 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 PCP4L1A6NKN8 68 aa5.2□□□□□ -1.58
TMEM39A-206ENST00000473684 ALG1L2C9J202 215 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms