RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 ZSCAN1Q8NBB4 408 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 ZNF548Q8NEK5 533 aaPredicted RBP7.06□□□□□ -1.28
CKS1B-205ENST00000473344 OR52K2Q8NGK3 314 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 TPCN2Q8NHX9 752 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 LMO3Q8TAP4 145 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 LMX1AQ8TE12 382 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 BTN2A2Q8WVV5 523 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 ARRDC3Q96B67 414 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 MED8Q96G25 268 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 ATXN7L3BQ96GX2 97 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 FEM1CQ96JP0 617 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 PPP1R13BQ96KQ4 1090 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 FAM81BQ96LP2 452 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 KREMEN1Q96MU8 473 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 SLC46A1Q96NT5 459 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 SLC2A13Q96QE2 648 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.06□□□□□ -1.28
CKS1B-205ENST00000473344 HDAC8Q9BY41 377 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 SLC17A9Q9BYT1 436 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 INTS2Q9H0H0 1204 aaKnown RBP7.06□□□□□ -1.28
CKS1B-205ENST00000473344 TKTL2Q9H0I9 626 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 TNKS2Q9H2K2 1166 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 ACBD3Q9H3P7 528 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 WDCPQ9H6R7 721 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 SYNDIG1Q9H7V2 258 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 GDPD2Q9HCC8 539 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 ASCL3Q9NQ33 180 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 ASNSD1Q9NWL6 643 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 RSPH14Q9UHP6 348 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 VPS51Q9UID3 782 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 ZFR2Q9UPR6 939 aaKnown RBP7.06□□□□□ -1.28
CKS1B-205ENST00000473344 CNTN6Q9UQ52 1028 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 TBC1D30Q9Y2I9 924 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 PCDHGA8Q9Y5G5 932 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 OR51B4Q9Y5P0 310 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 HS3ST3A1Q9Y663 406 aa7.06□□□□□ -1.28
CKS1B-205ENST00000473344 SPTY2D1-AS1A0A0U1RR47 76 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 EME2A4GXA9 379 aaPredicted RBP7.05□□□□□ -1.28
CKS1B-205ENST00000473344 POM121BA6NF01 834 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 K7ENP7 123 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 SNAP91O60641 907 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 LEFTY1O75610 366 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 TCEA3O75764 348 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 CNTN5O94779 1100 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 TNFSF15O95150 251 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 TUBBP07437 444 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 CCDC172P0C7W6 258 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 ADRB3P13945 408 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 NME1P15531 152 aaKnown RBP7.05□□□□□ -1.28
CKS1B-205ENST00000473344 OR1E1P30953 314 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 NOS2P35228 1153 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 KRT9P35527 623 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 IRAK1P51617 712 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 THOP1P52888 689 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 HNRNPH2P55795 449 aaKnown RBP7.05□□□□□ -1.28
CKS1B-205ENST00000473344 PTK2BQ14289 1009 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 FZD2Q14332 565 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 ARHGAP44Q17R89 818 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 DEFB133Q30KQ1 61 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 TMEM259Q4ZIN3 620 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 BRMS1LQ5PSV4 323 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 ACBD5Q5T8D3 534 aaPredicted RBP7.05□□□□□ -1.28
CKS1B-205ENST00000473344 KIAA1614Q5VZ46 1190 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 GUSBP11Q6P575 273 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 C22orf39Q6P5X5 142 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 INO80CQ6PI98 192 aaPredicted RBP7.05□□□□□ -1.28
CKS1B-205ENST00000473344 IGF2-ASQ6U949 168 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 CRTC1Q6UUV9 634 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 LINGO4Q6UY18 593 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 TFAP2DQ7Z6R9 452 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 SETD3Q86TU7 594 aaPredicted RBP7.05□□□□□ -1.28
CKS1B-205ENST00000473344 PASD1Q8IV76 773 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 RYBPQ8N488 228 aaPredicted RBP7.05□□□□□ -1.28
CKS1B-205ENST00000473344 DCAF4L2Q8NA75 395 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 CHST14Q8NCH0 376 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 WDR48Q8TAF3 677 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 SNRNP27Q8WVK2 155 aaKnown RBP7.05□□□□□ -1.28
CKS1B-205ENST00000473344 TTC9Q92623 222 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 BMFQ96LC9 184 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 CPXM1Q96SM3 734 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 ARHGAP9Q9BRR9 750 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 SPON2Q9BUD6 331 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 FAM117AQ9C073 453 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 SEMA4CQ9C0C4 833 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 ACP6Q9NPH0 428 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 RRN3Q9NYV6 651 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.05□□□□□ -1.28
CKS1B-205ENST00000473344 SALL4Q9UJQ4 1053 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 STAP1Q9ULZ2 295 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 DOLKQ9UPQ8 538 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 HEMK1Q9Y5R4 338 aaPredicted RBP7.05□□□□□ -1.28
CKS1B-205ENST00000473344 CSNK1G3Q9Y6M4 447 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 COL12A1Q99715 3063 aa7.05□□□□□ -1.28
CKS1B-205ENST00000473344 ZNF462Q96JM2 2506 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 A0A0D9SEW6 157 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 PYCARD-AS1I3L0S3 204 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 TPP1O14773 563 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 MUSKO15146 869 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 ARHGAP6O43182 974 aa7.04□□□□□ -1.28
CKS1B-205ENST00000473344 SMAD6O43541 496 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms