RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 SNRNP27Q8WVK2 155 aaKnown RBP9.3□□□□□ -0.92
CPSF4-211ENST00000471455 RAB7BQ96AH8 199 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 ARRDC3Q96B67 414 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 CPXM1Q96SM3 734 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 C1QTNF7Q9BXJ2 289 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 SLC17A9Q9BYT1 436 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 TKTL2Q9H0I9 626 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 WDCPQ9H6R7 721 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 CPNE5Q9HCH3 593 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 ASCL3Q9NQ33 180 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 ARHGEF38Q9NXL2 777 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.3□□□□□ -0.92
CPSF4-211ENST00000471455 SPASTQ9UBP0 616 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 APEX2Q9UBZ4 518 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 SALL4Q9UJQ4 1053 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 MAN1B1Q9UKM7 699 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 SATB2Q9UPW6 733 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 BPTFQ12830 3046 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 MAST4O15021 2626 aa9.3□□□□□ -0.92
CPSF4-211ENST00000471455 TRPM6Q9BX84 2022 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 SPTY2D1-AS1A0A0U1RR47 76 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 CXorf51AA0A1B0GTR3 108 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 ILVBLA1L0T0 632 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 CPED1A4D0V7 1026 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 TMX2-CTNND1H3BSU7 103 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 NEMP1O14524 444 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 TSPAN6O43657 245 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 SNAP91O60641 907 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 LEFTY1O75610 366 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 MT-CO1P00395 513 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 GIMD1P0DJR0 217 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 OR1E1P30953 314 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 L1CAMP32004 1257 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 SCNN1AP37088 669 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 CXCR3P49682 368 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 SULT1E1P49888 294 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 SERPINH1P50454 418 aaKnown RBP9.29□□□□□ -0.92
CPSF4-211ENST00000471455 RNF144AP50876 292 aaPredicted RBP9.29□□□□□ -0.92
CPSF4-211ENST00000471455 THOP1P52888 689 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 BPIFB4P59827 614 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 PDE1CQ14123 709 aaPredicted RBP9.29□□□□□ -0.92
CPSF4-211ENST00000471455 FZD2Q14332 565 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 CDKN3Q16667 212 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 SEL1L3Q68CR1 1132 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 GBP6Q6ZN66 633 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 DPY19L3Q6ZPD9 716 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 PASD1Q8IV76 773 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 OR52K2Q8NGK3 314 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 WDR36Q8NI36 951 aaKnown RBP9.29□□□□□ -0.92
CPSF4-211ENST00000471455 ASB12Q8WXK4 309 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 SHC3Q92529 594 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 MED8Q96G25 268 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 C1orf74Q96LT6 269 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 TBATAQ96M53 351 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 LENG8Q96PV6 779 aaPredicted RBP9.29□□□□□ -0.92
CPSF4-211ENST00000471455 PSMB7Q99436 277 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 HEPHQ9BQS7 1158 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 SPON2Q9BUD6 331 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 OSBPL2Q9H1P3 480 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 PDCL3Q9H2J4 239 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 ATP13A1Q9HD20 1204 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 GPR27Q9NS67 375 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 ZFR2Q9UPR6 939 aaKnown RBP9.29□□□□□ -0.92
CPSF4-211ENST00000471455 HRH3Q9Y5N1 445 aa9.29□□□□□ -0.92
CPSF4-211ENST00000471455 TDRD6O60522 2096 aaKnown RBP9.28□□□□□ -0.92
CPSF4-211ENST00000471455 CCDC187A0A096LP49 1063 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 GTPBP10A4D1E9 387 aaKnown RBP9.28□□□□□ -0.92
CPSF4-211ENST00000471455 EME2A4GXA9 379 aaPredicted RBP9.28□□□□□ -0.92
CPSF4-211ENST00000471455 DRGXA6NNA5 263 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 B8ZZF3 427 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 K7ERQ8 282 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 TOR1BO14657 336 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 NEBLO76041 1014 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 CNTN5O94779 1100 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 PAK4O96013 591 aaPredicted RBP9.28□□□□□ -0.92
CPSF4-211ENST00000471455 IL2RAP01589 272 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 ERBB2P04626 1255 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 ANXA6P08133 673 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 LORP23490 312 aaPredicted RBP9.28□□□□□ -0.92
CPSF4-211ENST00000471455 SOX11P35716 441 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 DNA2P51530 1060 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 IRAK1P51617 712 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 CCNHP51946 323 aaPredicted RBP9.28□□□□□ -0.92
CPSF4-211ENST00000471455 DEUP1Q05D60 604 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 CLN3Q13286 438 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 EIF3IQ13347 325 aaKnown RBP9.28□□□□□ -0.92
CPSF4-211ENST00000471455 SPIDRQ14159 915 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 POLD3Q15054 466 aaPredicted RBP9.28□□□□□ -0.92
CPSF4-211ENST00000471455 ARHGAP44Q17R89 818 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 EXOC3L4Q17RC7 722 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 ALFQ53S48 1182 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 ZNF542PQ5EBM4 170 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 CARD16Q5EG05 197 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 ISM2Q6H9L7 571 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 ESRP1Q6NXG1 681 aaKnown RBP9.28□□□□□ -0.92
CPSF4-211ENST00000471455 PCSK4Q6UW60 755 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 XKR5Q6UX68 686 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 LINGO4Q6UY18 593 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 CCDC81Q6ZN84 652 aa9.28□□□□□ -0.92
CPSF4-211ENST00000471455 TFAP2DQ7Z6R9 452 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms