RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 PRKG1Q13976 671 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 SLC39A14Q15043 492 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 POSTNQ15063 836 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 PWP2Q15269 919 aaKnown RBP1.51□□□□□ -2.17
UBXN4-207ENST00000471246 ZNF718Q3SXZ3 478 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 ZNF672Q499Z4 452 aaPredicted RBP1.51□□□□□ -2.17
UBXN4-207ENST00000471246 SETMARQ53H47 684 aaPredicted RBP1.51□□□□□ -2.17
UBXN4-207ENST00000471246 SH2D4BQ5SQS7 431 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 GFI1BQ5VTD9 330 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 TYW3Q6IPR3 259 aaKnown RBP1.51□□□□□ -2.17
UBXN4-207ENST00000471246 RETSATQ6NUM9 610 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 SPSB3Q6PJ21 355 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 KRTAP5-5Q701N2 237 aaPredicted RBP1.51□□□□□ -2.17
UBXN4-207ENST00000471246 MON1AQ86VX9 555 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 DENND6AQ8IWF6 608 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 CCDC105Q8IYK2 499 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 TCP11L2Q8N4U5 519 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 MYCT1Q8N699 235 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 SAMD3Q8N6K7 520 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 LILRB1Q8NHL6 650 aaPredicted RBP1.51□□□□□ -2.17
UBXN4-207ENST00000471246 CEP70Q8NHQ1 597 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 RASSF8Q8NHQ8 419 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 RFWD2Q8NHY2 731 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 WFIKKN2Q8TEU8 576 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 TRAPPC12Q8WVT3 735 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 NR4A3Q92570 626 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 RILPL2Q969X0 211 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 RNFT2Q96EX2 444 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 MASTLQ96GX5 879 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 IGSF21Q96ID5 467 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 SLC25A33Q9BSK2 321 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 DDX31Q9H8H2 851 aaKnown RBP1.51□□□□□ -2.17
UBXN4-207ENST00000471246 CHODLQ9H9P2 273 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 ENTPD7Q9NQZ7 604 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 IFT80Q9P2H3 777 aaPredicted RBP1.51□□□□□ -2.17
UBXN4-207ENST00000471246 FEM1BQ9UK73 627 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 SLC45A1Q9Y2W3 748 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 DERAQ9Y315 318 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 MORC2Q9Y6X9 1032 aaPredicted RBP1.51□□□□□ -2.17
UBXN4-207ENST00000471246 A0A0U1RQJ8 604 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 A0A1B0GVM2 712 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 FAM157AC9JC47 383 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 J3KR12 359 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 CHL1O00533 1208 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 NTN3O00634 580 aaPredicted RBP1.5□□□□□ -2.17
UBXN4-207ENST00000471246 GRID2O43424 1007 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 BUB3O43684 328 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 SLC25A17O43808 307 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 PLGP00747 810 aaPredicted RBP1.5□□□□□ -2.17
UBXN4-207ENST00000471246 SERPINC1P01008 464 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 UMODP07911 640 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 TNNT1P13805 278 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 RXRAP19793 462 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 MYF6P23409 242 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 TTKP33981 857 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 HNF1BP35680 557 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 TRAPPC10P48553 1259 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 CENPAP49450 140 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 AARSP49588 968 aaKnown RBP eCLIP1.5□□□□□ -2.17
UBXN4-207ENST00000471246 ARSFP54793 590 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 ADORA2A-AS1P86434 159 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 DDR1Q08345 913 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 ST3GAL1Q11201 340 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 DHX34Q14147 1143 aaKnown RBP1.5□□□□□ -2.17
UBXN4-207ENST00000471246 MORC3Q14149 939 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 LPIN1Q14693 890 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 ZRSR1Q15695 479 aaKnown RBP1.5□□□□□ -2.17
UBXN4-207ENST00000471246 KIF19Q2TAC6 998 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 FBXO43Q4G163 708 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 CTXN3Q4LDR2 81 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 XKR9Q5GH70 373 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 WBP2NLQ6ICG8 309 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 NAPEPLDQ6IQ20 393 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 DENND1BQ6P3S1 775 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 SFTPA2Q8IWL1 248 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 MB21D2Q8IYB1 491 aaPredicted RBP1.5□□□□□ -2.17
UBXN4-207ENST00000471246 TMEM57Q8N5G2 664 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 RFLNBQ8N5W9 214 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 AADATQ8N5Z0 425 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 ANKRD44Q8N8A2 993 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 MCPH1Q8NEM0 835 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 DNAAF1Q8NEP3 725 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 ARRDC2Q8TBH0 407 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 AFG1LQ8WV93 481 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 SDCCAG3Q96C92 435 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 RNF183Q96D59 192 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 DUX5Q96PT3 197 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 YME1L1Q96TA2 773 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 PKP4Q99569 1192 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 PAGR1Q9BTK6 254 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 NPLQ9BXD5 320 aaPredicted RBP1.5□□□□□ -2.17
UBXN4-207ENST00000471246 LMAN2LQ9H0V9 348 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 GAREM1Q9H706 876 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 TTC12Q9H892 705 aaPredicted RBP1.5□□□□□ -2.17
UBXN4-207ENST00000471246 RASSF1Q9NS23 344 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 OR6C3Q9NZP0 311 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 KIF17Q9P2E2 1029 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 MALT1Q9UDY8 824 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 CD207Q9UJ71 328 aa1.5□□□□□ -2.17
UBXN4-207ENST00000471246 CNPY2Q9Y2B0 182 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms