RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 ARHGAP12Q8IWW6 846 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 LZTR1Q8N653 840 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 NPWQ8N729 165 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 MFSD2AQ8NA29 543 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 RHBDD1Q8TEB9 315 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 TEKT4Q8WW24 435 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 NHEJ1Q9H9Q4 299 aaPredicted RBP15.92■□□□□ 0.14
HDAC6-218ENST00000470942 PDFQ9HBH1 243 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 GDF3Q9NR23 364 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 UVRAGQ9P2Y5 699 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 LHX3Q9UBR4 397 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 ZFR2Q9UPR6 939 aaKnown RBP15.92■□□□□ 0.14
HDAC6-218ENST00000470942 CA5BQ9Y2D0 317 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 PCDHGB2Q9Y5G2 931 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 FADS3Q9Y5Q0 445 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 ANKRD36A6QL64 1941 aa15.92■□□□□ 0.14
HDAC6-218ENST00000470942 SHROOM3Q8TF72 1996 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 INSIG1O15503 277 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 MAGEC1O60732 1142 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 PALMO75781 387 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 PMLP29590 882 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 AKT2P31751 481 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 CDH6P55285 790 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 NXPH1P58417 271 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 RPS21P63220 83 aaKnown RBP15.91■□□□□ 0.14
HDAC6-218ENST00000470942 SLC25A11Q02978 314 aaKnown RBP15.91■□□□□ 0.14
HDAC6-218ENST00000470942 ZNF284Q2VY69 593 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 AFMIDQ63HM1 303 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 KIAA1161Q6NSJ0 714 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 SARM1Q6SZW1 724 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 TMCO3Q6UWJ1 677 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 ARHGAP36Q6ZRI8 547 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 TTC7BQ86TV6 843 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 RAB7BQ96AH8 199 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 KLHDC7BQ96G42 594 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 CSPG4P5Q96PW8 444 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 ELF4Q99607 663 aaPredicted RBP15.91■□□□□ 0.14
HDAC6-218ENST00000470942 PCDH18Q9HCL0 1135 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 FZD3Q9NPG1 666 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 SPTLC3Q9NUV7 552 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 ETNK2Q9NVF9 386 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 MFHAS1Q9Y4C4 1052 aa15.91■□□□□ 0.14
HDAC6-218ENST00000470942 A0A1B0GTQ1 180 aa15.9■□□□□ 0.14
HDAC6-218ENST00000470942 TMEM110-MUSTN1A8MSY1 372 aa15.9■□□□□ 0.14
HDAC6-218ENST00000470942 FLRT2O43155 660 aa15.9■□□□□ 0.14
HDAC6-218ENST00000470942 TSPAN6O43657 245 aa15.9■□□□□ 0.14
HDAC6-218ENST00000470942 AP1G1O43747 822 aa15.9■□□□□ 0.14
HDAC6-218ENST00000470942 PROSCO94903 275 aa15.9■□□□□ 0.14
HDAC6-218ENST00000470942 TMEM253P0C7T8 217 aa15.9■□□□□ 0.14
HDAC6-218ENST00000470942 HNRNPA2B1P22626 353 aaKnown RBP15.9■□□□□ 0.14
HDAC6-218ENST00000470942 XPAP23025 273 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-218ENST00000470942 ABL2P42684 1182 aa15.9■□□□□ 0.14
HDAC6-218ENST00000470942 IL10RBQ08334 325 aa15.9■□□□□ 0.14
HDAC6-218ENST00000470942 TBX2Q13207 712 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-218ENST00000470942 IQCHQ86VS3 1027 aa15.9■□□□□ 0.14
HDAC6-218ENST00000470942 TP53INP2Q8IXH6 220 aa15.9■□□□□ 0.14
HDAC6-218ENST00000470942 CINPQ9BW66 212 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-218ENST00000470942 SLC17A9Q9BYT1 436 aa15.9■□□□□ 0.14
HDAC6-218ENST00000470942 CPEB1Q9BZB8 566 aaKnown RBP15.9■□□□□ 0.14
HDAC6-218ENST00000470942 IPO11Q9UI26 975 aaKnown RBP15.9■□□□□ 0.14
HDAC6-218ENST00000470942 ANGPTL2Q9UKU9 493 aa15.9■□□□□ 0.14
HDAC6-218ENST00000470942 PCOLCE2Q9UKZ9 415 aa15.9■□□□□ 0.14
HDAC6-218ENST00000470942 PIGNO95427 931 aa15.89■□□□□ 0.13
HDAC6-218ENST00000470942 PAK4O96013 591 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-218ENST00000470942 THEGLP0DJG4 465 aa15.89■□□□□ 0.13
HDAC6-218ENST00000470942 ARRB1P49407 418 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-218ENST00000470942 OVGP1Q12889 678 aa15.89■□□□□ 0.13
HDAC6-218ENST00000470942 SGCGQ13326 291 aa15.89■□□□□ 0.13
HDAC6-218ENST00000470942 GRM3Q14832 879 aa15.89■□□□□ 0.13
HDAC6-218ENST00000470942 ATP13A4Q4VNC1 1196 aa15.89■□□□□ 0.13
HDAC6-218ENST00000470942 TMEM259Q4ZIN3 620 aa15.89■□□□□ 0.13
HDAC6-218ENST00000470942 LRRC73Q5JTD7 316 aa15.89■□□□□ 0.13
HDAC6-218ENST00000470942 ZFYVE27Q5T4F4 411 aa15.89■□□□□ 0.13
HDAC6-218ENST00000470942 DBX2Q6ZNG2 339 aa15.89■□□□□ 0.13
HDAC6-218ENST00000470942 SRLQ86TD4 932 aa15.89■□□□□ 0.13
HDAC6-218ENST00000470942 SPATS2Q86XZ4 545 aaKnown RBP15.89■□□□□ 0.13
HDAC6-218ENST00000470942 CPNE8Q86YQ8 564 aa15.89■□□□□ 0.13
HDAC6-218ENST00000470942 KCTD6Q8NC69 237 aa15.89■□□□□ 0.13
HDAC6-218ENST00000470942 TSEN2Q8NCE0 465 aaKnown RBP15.89■□□□□ 0.13
HDAC6-218ENST00000470942 VOPP1Q96AW1 172 aa15.89■□□□□ 0.13
HDAC6-218ENST00000470942 LCMT1Q9UIC8 334 aa15.89■□□□□ 0.13
HDAC6-218ENST00000470942 GGT7Q9UJ14 662 aa15.89■□□□□ 0.13
HDAC6-218ENST00000470942 ITM2BQ9Y287 266 aa15.89■□□□□ 0.13
HDAC6-218ENST00000470942 BTBD3Q9Y2F9 522 aa15.89■□□□□ 0.13
HDAC6-218ENST00000470942 TDRD6O60522 2096 aaKnown RBP15.89■□□□□ 0.13
HDAC6-218ENST00000470942 IGLON5A6NGN9 336 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 PCDHGA12O60330 932 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 ITGAVP06756 1048 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 TIMP2P16035 220 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 SERPINB6P35237 376 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 GRK6P43250 576 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 CLDN2P57739 230 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 MMRN1Q13201 1228 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 MESDQ14696 234 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 RFTN1Q14699 578 aaPredicted RBP15.88■□□□□ 0.13
HDAC6-218ENST00000470942 INAVAQ3KP66 663 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 CFAP58Q5T655 872 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 GATAD2AQ86YP4 633 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 OXR1Q8N573 874 aa15.88■□□□□ 0.13
HDAC6-218ENST00000470942 PAF1Q8N7H5 531 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms