RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 ARL10Q8N8L6 244 aa13.03□□□□□ -0.32
TRAPPC12-216ENST00000469400 KYQ8NBH2 561 aa13.03□□□□□ -0.32
TRAPPC12-216ENST00000469400 RAB7BQ96AH8 199 aa13.03□□□□□ -0.32
TRAPPC12-216ENST00000469400 CCDC74AQ96AQ1 378 aa13.03□□□□□ -0.32
TRAPPC12-216ENST00000469400 DHTKD1Q96HY7 919 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC12-216ENST00000469400 C1orf74Q96LT6 269 aa13.03□□□□□ -0.32
TRAPPC12-216ENST00000469400 GFM1Q96RP9 751 aaKnown RBP13.03□□□□□ -0.32
TRAPPC12-216ENST00000469400 ZDHHC6Q9H6R6 413 aa13.03□□□□□ -0.32
TRAPPC12-216ENST00000469400 TMPRSS4Q9NRS4 437 aa13.03□□□□□ -0.32
TRAPPC12-216ENST00000469400 SIRPGQ9P1W8 387 aa13.03□□□□□ -0.32
TRAPPC12-216ENST00000469400 HECAQ9UBI9 543 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC12-216ENST00000469400 PISDQ9UG56 409 aa13.03□□□□□ -0.32
TRAPPC12-216ENST00000469400 ACTL7AQ9Y615 435 aa13.03□□□□□ -0.32
TRAPPC12-216ENST00000469400 FLNCQ14315 2725 aa13.02□□□□□ -0.32
TRAPPC12-216ENST00000469400 IGLV3-10A0A075B6K4 115 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 A0A1W2PQM1 296 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 BECN2A8MW95 431 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 SMC2O95347 1197 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 AFPP02771 609 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 RPLP0P05388 317 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 JMJD7P0C870 316 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 GKP32189 559 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 CCKBRP32239 447 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 IGFALSP35858 605 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 EIF4A3P38919 411 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 YPEL5P62699 121 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 ARF5P84085 180 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 SLC6A3Q01959 620 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 PPARDQ03181 441 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 STIM1Q13586 685 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 TBR1Q16650 682 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 ZNF805Q5CZA5 627 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 MANEAQ5SRI9 462 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 ARTNQ5T4W7 220 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 TTI2Q6NXR4 508 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 GJB7Q6PEY0 223 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 ZNF783Q6ZMS7 281 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 MACC1Q6ZN28 852 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 VASH2Q86V25 355 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 VPS36Q86VN1 386 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 TRIM59Q8IWR1 403 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 SDR16C5Q8N3Y7 309 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 ZNF397Q8NF99 534 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 OR6K2Q8NGY2 324 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 SMARCE1Q969G3 411 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 NPY6RQ99463 290 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 TM6SF2Q9BZW4 377 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 GDPD2Q9HCC8 539 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 ATP13A1Q9HD20 1204 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 SEPT10Q9P0V9 454 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 ZNF212Q9UDV6 495 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 DOLKQ9UPQ8 538 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 LOXL2Q9Y4K0 774 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 PCDHGA4Q9Y5G9 962 aa13.02□□□□□ -0.33
TRAPPC12-216ENST00000469400 LRRK2Q5S007 2527 aa13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 SRGAP2O75044 1071 aa13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 CD160O95971 181 aa13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 WT1P19544 449 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 USP8P40818 1118 aa13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 RNASE9P60153 205 aaKnown RBP13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 CYP4F2P78329 520 aa13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 TLE1Q04724 770 aa13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 TCEA2Q15560 299 aa13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 ISM2Q6H9L7 571 aa13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 LVRNQ6Q4G3 990 aa13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 ENOSF1Q7L5Y1 443 aa13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 PLPP6Q8IY26 295 aa13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 FSTL5Q8N475 847 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 RYBPQ8N488 228 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 C1orf131Q8NDD1 294 aaKnown RBP13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 PCDH19Q8TAB3 1148 aa13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 SCG3Q8WXD2 468 aaKnown RBP13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 NT5C3BQ969T7 300 aa13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 VOPP1Q96AW1 172 aa13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 TMEM74Q96NL1 305 aa13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 CPEB1Q9BZB8 566 aaKnown RBP13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 LRRN3Q9H3W5 708 aa13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 MBNL1Q9NR56 388 aaKnown RBP13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 RRN3Q9NYV6 651 aa13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 ANKMY1Q9P2S6 941 aa13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 PCDHGC3Q9UN70 934 aa13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.01□□□□□ -0.33
TRAPPC12-216ENST00000469400 PRAMEF33A0A0G2JMD5 474 aa13□□□□□ -0.33
TRAPPC12-216ENST00000469400 AGRPO00253 132 aa13□□□□□ -0.33
TRAPPC12-216ENST00000469400 TOR1BO14657 336 aa13□□□□□ -0.33
TRAPPC12-216ENST00000469400 AREL1O15033 823 aa13□□□□□ -0.33
TRAPPC12-216ENST00000469400 PRAMEF10O60809 474 aa13□□□□□ -0.33
TRAPPC12-216ENST00000469400 MMP20O60882 483 aa13□□□□□ -0.33
TRAPPC12-216ENST00000469400 PPFIA2O75334 1257 aa13□□□□□ -0.33
TRAPPC12-216ENST00000469400 F9P00740 461 aa13□□□□□ -0.33
TRAPPC12-216ENST00000469400 NTRK1P04629 796 aa13□□□□□ -0.33
TRAPPC12-216ENST00000469400 ALPIP09923 528 aa13□□□□□ -0.33
TRAPPC12-216ENST00000469400 ITIH1P19827 911 aa13□□□□□ -0.33
TRAPPC12-216ENST00000469400 SULT1E1P49888 294 aa13□□□□□ -0.33
TRAPPC12-216ENST00000469400 BLKP51451 505 aa13□□□□□ -0.33
TRAPPC12-216ENST00000469400 HK3P52790 923 aa13□□□□□ -0.33
TRAPPC12-216ENST00000469400 SNX16P57768 344 aa13□□□□□ -0.33
TRAPPC12-216ENST00000469400 GNA12Q03113 381 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms