RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 SNUPNO95149 360 aaKnown RBP10.3□□□□□ -0.76
MSH5-213ENST00000468136 PAPLNO95428 1278 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 CRTAMO95727 393 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 MMP2P08253 660 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 TROVE2P10155 538 aaKnown RBP eCLIP10.3□□□□□ -0.76
MSH5-213ENST00000468136 ERVK-10P10266 1014 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 NEFHP12036 1026 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 EN2P19622 333 aaPredicted RBP10.3□□□□□ -0.76
MSH5-213ENST00000468136 CR2P20023 1033 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 PSMA3P25788 255 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 CRABP2P29373 138 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 TYK2P29597 1187 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 ACVRL1P37023 503 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 CLCN4P51793 760 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 AP1S1P61966 158 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 RPS24P62847 133 aaKnown RBP10.3□□□□□ -0.76
MSH5-213ENST00000468136 CRADDP78560 199 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 CDH18Q13634 790 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 DMC1Q14565 340 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 TAF1BQ53T94 588 aaPredicted RBP10.3□□□□□ -0.76
MSH5-213ENST00000468136 HSP90AA5PQ58FG0 334 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 SPDYAQ5MJ70 313 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 TSTD2Q5T7W7 516 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 MROH9Q5TGP6 573 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 CXorf57Q6NSI4 855 aaKnown RBP10.3□□□□□ -0.76
MSH5-213ENST00000468136 RFWD3Q6PCD5 774 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 GAREM2Q75VX8 874 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 SPATA21Q7Z572 469 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 TMCO2Q7Z6W1 182 aaPredicted RBP10.3□□□□□ -0.76
MSH5-213ENST00000468136 STRA8Q7Z7C7 330 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 NDUFAF2Q8N183 169 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 ARL14EPQ8N8R7 260 aaPredicted RBP10.3□□□□□ -0.76
MSH5-213ENST00000468136 FIBINQ8TAL6 211 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 GDAP1Q8TB36 358 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 STYXQ8WUJ0 223 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 AUTS2Q8WXX7 1259 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 ZNF75CPQ92670 426 aaPredicted RBP10.3□□□□□ -0.76
MSH5-213ENST00000468136 MFSD3Q96ES6 412 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 GPR22Q99680 433 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 SPON2Q9BUD6 331 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 MCOLN1Q9GZU1 580 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 MUC3BQ9H195 1237 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 KDM4CQ9H3R0 1056 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 MFSD1Q9H3U5 465 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 MANSC1Q9H8J5 431 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 KIF9Q9HAQ2 790 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 SCUBE2Q9NQ36 999 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 GKN1Q9NS71 199 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 UBP1Q9NZI7 540 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 VPS9D1Q9Y2B5 631 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 SHROOM3Q8TF72 1996 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.29□□□□□ -0.76
MSH5-213ENST00000468136 LINC01553A4QN01 128 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 EDF1O60869 148 aaKnown RBP10.29□□□□□ -0.76
MSH5-213ENST00000468136 TBL1XO60907 577 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 GRK2P25098 689 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 NMBRP28336 390 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 AVPR1AP37288 418 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 SLC26A3P40879 764 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 ARCN1P48444 511 aaKnown RBP10.29□□□□□ -0.76
MSH5-213ENST00000468136 CD151P48509 253 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 SERPINB4P48594 390 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 CLCN5P51795 746 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 POU4F1Q01851 419 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 DSC2Q02487 901 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 ACVR1Q04771 509 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 SULT2A1Q06520 285 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 CCDC15Q0P6D6 951 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 ASPHQ12797 758 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 POU6F1Q14863 301 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 TSNAXIP1Q2TAA8 658 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 RNF219Q5W0B1 726 aaPredicted RBP10.29□□□□□ -0.76
MSH5-213ENST00000468136 TXNDC8Q6A555 127 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 MRNIPQ6NTE8 343 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 C6orf89Q6UWU4 347 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 CCDC121Q6ZUS5 278 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 C7orf61Q8IZ16 206 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 CFAP52Q8N1V2 620 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 TDRD5Q8NAT2 981 aaKnown RBP10.29□□□□□ -0.76
MSH5-213ENST00000468136 C2CD4AQ8NCU7 369 aaPredicted RBP10.29□□□□□ -0.76
MSH5-213ENST00000468136 OR7D4Q8NG98 312 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 GPR150Q8NGU9 434 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 RDH11Q8TC12 318 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 PTPRN2Q92932 1015 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 TSPAN17Q96FV3 270 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 APOL2Q9BQE5 337 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 FEM1AQ9BSK4 669 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 MCMBPQ9BTE3 642 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 ACTR5Q9H9F9 607 aaPredicted RBP10.29□□□□□ -0.76
MSH5-213ENST00000468136 CXXC1Q9P0U4 656 aaPredicted RBP10.29□□□□□ -0.76
MSH5-213ENST00000468136 SIRPGQ9P1W8 387 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.29□□□□□ -0.76
MSH5-213ENST00000468136 DNMT3BQ9UBC3 853 aaKnown RBP10.29□□□□□ -0.76
MSH5-213ENST00000468136 TLK1Q9UKI8 766 aa10.29□□□□□ -0.76
MSH5-213ENST00000468136 A0A087X1B8 175 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 A0A0D9SEW6 157 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 CCDC189A1A4V9 331 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 HMX2A2RU54 273 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 C2orf81A6NN90 581 aa10.28□□□□□ -0.76
MSH5-213ENST00000468136 LEFTY2O00292 366 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms