RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 H2AFXP16104 143 aaPredicted RBP6.96□□□□□ -1.3
SCAF4-204ENST00000467731 IVDP26440 423 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 ADCY8P40145 1251 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 NNMTP40261 264 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 RHOAP61586 193 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 BASP1P80723 227 aaKnown RBP6.96□□□□□ -1.3
SCAF4-204ENST00000467731 GUCY2DQ02846 1103 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 TRADDQ15628 312 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 DLG2Q15700 870 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 MLF2Q15773 248 aaPredicted RBP6.96□□□□□ -1.3
SCAF4-204ENST00000467731 DBN1Q16643 649 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 TSNAXIP1Q2TAA8 658 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 DGKKQ5KSL6 1271 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 SYCP2LQ5T4T6 812 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 EMC10Q5UCC4 262 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 CCDC70Q6NSX1 233 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 C22orf39Q6P5X5 142 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 IQCF2Q8IXL9 164 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 CCHCR1Q8TD31 782 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 CASKIN2Q8WXE0 1202 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 UBXN4Q92575 508 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 NECAB3Q96P71 396 aaPredicted RBP6.96□□□□□ -1.3
SCAF4-204ENST00000467731 MGME1Q9BQP7 344 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 GORASP1Q9BQQ3 440 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 RAB17Q9H0T7 212 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 GBA3Q9H227 469 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 TNKS2Q9H2K2 1166 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 DPH5Q9H2P9 285 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 ETNK1Q9HBU6 452 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 RAB6BQ9NRW1 208 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 UBP1Q9NZI7 540 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 LHX3Q9UBR4 397 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 MUTYHQ9UIF7 546 aa6.96□□□□□ -1.3
SCAF4-204ENST00000467731 DNAH14Q0VDD8 3507 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 TTC34A8MYJ7 566 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 WASH3PC4AMC7 463 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 TIMM44O43615 452 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 BNIP3LO60238 219 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 MT-CYBP00156 380 aaPredicted RBP6.95□□□□□ -1.3
SCAF4-204ENST00000467731 EGFP01133 1207 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 PYGLP06737 847 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 SRPRAP08240 638 aaKnown RBP6.95□□□□□ -1.3
SCAF4-204ENST00000467731 GCKP35557 465 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 SCNN1BP51168 640 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 SEC13P55735 322 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 ST8SIA6P61647 398 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 DSC2Q02487 901 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 ZNF234Q14588 700 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 ATXN7L2Q5T6C5 722 aaPredicted RBP6.95□□□□□ -1.3
SCAF4-204ENST00000467731 EGFLAMQ63HQ2 1017 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 DUPD1Q68J44 220 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 ALG1LQ6GMV1 187 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 ITPRIPL1Q6GPH6 555 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 FSTL4Q6MZW2 842 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 Q6ZVU0 165 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 METTL3Q86U44 580 aaKnown RBP6.95□□□□□ -1.3
SCAF4-204ENST00000467731 CACTIN-AS1Q8N1I8 211 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 SPATA22Q8NHS9 363 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 UCMAQ8WVF2 138 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 FAM3CQ92520 227 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 ACOX2Q99424 681 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 SEMA3CQ99985 751 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 ANKZF1Q9H8Y5 726 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 GLOD4Q9HC38 313 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 EPB41L5Q9HCM4 733 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 ARHGEF3Q9NR81 526 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 SNX24Q9Y343 169 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 STARD13Q9Y3M8 1113 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 VPS13AQ96RL7 3174 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 KRBA1A5PL33 1030 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 ATP9BO43861 1147 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 SEC31AO94979 1220 aaKnown RBP6.95□□□□□ -1.3
SCAF4-204ENST00000467731 APRTP07741 180 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 HLA-EP13747 358 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 CR2P20023 1033 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 DRD1P21728 446 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 TIE1P35590 1138 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 CD86P42081 329 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 IL12RB1P42701 662 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 TNFRSF4P43489 277 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 KIR2DL1P43626 348 aaPredicted RBP6.95□□□□□ -1.3
SCAF4-204ENST00000467731 RPL21P46778 160 aaKnown RBP6.95□□□□□ -1.3
SCAF4-204ENST00000467731 TUBB4BP68371 445 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 NIPAL4Q0D2K0 466 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 GRSF1Q12849 480 aaKnown RBP eCLIP6.95□□□□□ -1.3
SCAF4-204ENST00000467731 PARP6Q2NL67 630 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 FNDC3BQ53EP0 1204 aaKnown RBP6.95□□□□□ -1.3
SCAF4-204ENST00000467731 SERPINA13PQ6UXR4 307 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 OR6K2Q8NGY2 324 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 FRS2Q8WU20 508 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 ISG20Q96AZ6 181 aaKnown RBP6.95□□□□□ -1.3
SCAF4-204ENST00000467731 MSANTD3Q96H12 275 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 OXNAD1Q96HP4 312 aaPredicted RBP6.95□□□□□ -1.3
SCAF4-204ENST00000467731 RBM15Q96T37 977 aaKnown RBP eCLIP6.95□□□□□ -1.39e-7■■■□□ 16.3
SCAF4-204ENST00000467731 CEP44Q9C0F1 390 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 SLC25A51Q9H1U9 297 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 MTG2Q9H4K7 406 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 CACNA2D2Q9NY47 1150 aa6.95□□□□□ -1.3
SCAF4-204ENST00000467731 THAP10Q9P2Z0 257 aaPredicted RBP6.95□□□□□ -1.3
SCAF4-204ENST00000467731 FBXL21Q9UKT6 434 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms