RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 TRIM7Q9C029 511 aa14.99□□□□□ -0.01
ATPAF2-204ENST00000467560 RETREG1Q9H6L5 497 aa14.99□□□□□ -0.01
ATPAF2-204ENST00000467560 RTN4Q9NQC3 1192 aaKnown RBP14.99□□□□□ -0.01
ATPAF2-204ENST00000467560 PNMA8BQ9ULN7 279 aaPredicted RBP14.99□□□□□ -0.01
ATPAF2-204ENST00000467560 HS3ST3A1Q9Y663 406 aa14.99□□□□□ -0.01
ATPAF2-204ENST00000467560 U3KQA8 63 aa14.99□□□□□ -0.01
ATPAF2-204ENST00000467560 ADAMTS20P59510 1910 aa14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 LRRC53A6NM62 1247 aa14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 A6NNZ2 444 aa14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 RASA4BC9J798 803 aa14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 AREL1O15033 823 aa14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 RASA4O43374 803 aa14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 CREB3O43889 395 aa14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 FERP16591 822 aa14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 ACP1P24666 158 aa14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 INSM1Q01101 510 aaPredicted RBP14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 MAMLD1Q13495 774 aa14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 CYTH1Q15438 398 aa14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 KYAT3Q6YP21 454 aaKnown RBP14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 TMC6Q7Z403 805 aa14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 ZNF354CQ86Y25 554 aa14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 OR4C6Q8NH72 309 aa14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 CRELD1Q96HD1 420 aa14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 EXOC2Q96KP1 924 aa14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 PEBP4Q96S96 227 aa14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 DNAJC28Q9NX36 388 aa14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 LHX3Q9UBR4 397 aa14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 HPCAL4Q9UM19 191 aa14.98□□□□□ -0.01
ATPAF2-204ENST00000467560 BAHCC1Q9P281 2608 aa14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 TDRD6O60522 2096 aaKnown RBP14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 ASXL3Q9C0F0 2248 aa14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 BPTFQ12830 3046 aa14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 SPTY2D1-AS1A0A0U1RR47 76 aa14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 WASH4PA8MWX3 477 aa14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 J3KR12 359 aa14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 TSPAN6O43657 245 aa14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 POP4O95707 220 aaKnown RBP14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 TIMP2P16035 220 aa14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 PTMSP20962 102 aa14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 GEMIN4P57678 1058 aaKnown RBP14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 SNRPD1P62314 119 aaKnown RBP14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 SERINC3Q13530 473 aa14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 DCUN1D2Q6PH85 259 aa14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 GDPD4Q6W3E5 623 aa14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 ZNF571Q7Z3V5 609 aaPredicted RBP14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 UMODL1-AS1Q8N2C9 162 aa14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 RFFLQ8WZ73 363 aa14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 CENPTQ96BT3 561 aa14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 CELF6Q96J87 481 aaKnown RBP14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 LRIG1Q96JA1 1093 aa14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 NAP1L5Q96NT1 182 aaPredicted RBP14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 LENG8Q96PV6 779 aaPredicted RBP14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 TTYH3Q9C0H2 523 aa14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 TCEAL2Q9H3H9 227 aaPredicted RBP14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 LRRC19Q9H756 370 aa14.97□□□□□ -0.01
ATPAF2-204ENST00000467560 MMP20O60882 483 aa14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 PIGNO95427 931 aa14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 MBD3O95983 291 aa14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 TNFAIP3P21580 790 aa14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 RGRP47804 291 aa14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 PFN3P60673 137 aa14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 RHOAP61586 193 aa14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 EIF2B5Q13144 721 aaKnown RBP14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 ILKQ13418 452 aa14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 PDE1CQ14123 709 aaPredicted RBP14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 PLEKHA7Q6IQ23 1121 aa14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 NYAP1Q6ZVC0 841 aa14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 CYP4V2Q6ZWL3 525 aaPredicted RBP14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 TTC7BQ86TV6 843 aa14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 ZNF548Q8NEK5 533 aaPredicted RBP14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 GDAP1L1Q96MZ0 367 aa14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 KCTD15Q96SI1 283 aaPredicted RBP14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 EPAS1Q99814 870 aa14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 HAUS4Q9H6D7 363 aa14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 PDFQ9HBH1 243 aa14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 MBNL1Q9NR56 388 aaKnown RBP14.96□□□□□ -0.01
ATPAF2-204ENST00000467560 ZSCAN5CA6NGD5 496 aaPredicted RBP14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 K7ESM1 405 aa14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 DDX3XO00571 662 aaKnown RBP eCLIP14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 NEMP1O14524 444 aa14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 FPGTO14772 594 aa14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 SCAMP1O15126 338 aa14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 CASC3O15234 703 aaKnown RBP14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 TLX3O43711 291 aaPredicted RBP14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 BUB1BO60566 1050 aaPredicted RBP14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 CSF2P04141 144 aa14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 CDK4P11802 303 aa14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 CKMT1AP12532 417 aa14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 NME1P15531 152 aaKnown RBP14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 HNF1BP35680 557 aa14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 IGFALSP35858 605 aa14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 YBEYP58557 167 aaPredicted RBP14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 SEMG2Q02383 582 aa14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 SGCGQ13326 291 aa14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 PARP15Q460N3 678 aa14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 INO80DQ53TQ3 878 aaPredicted RBP14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 ARHGAP36Q6ZRI8 547 aa14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 PDZD3Q86UT5 571 aa14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 VPS36Q86VN1 386 aa14.95□□□□□ -0.02
ATPAF2-204ENST00000467560 ZSWIM9Q86XI8 627 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms