RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 ATP11CQ8NB49 1132 aa16.04■□□□□ 0.16
TSSC4-208ENST00000467308 KLK6Q92876 244 aa16.04■□□□□ 0.16
TSSC4-208ENST00000467308 PCDHB18PQ96TA0 734 aa16.04■□□□□ 0.16
TSSC4-208ENST00000467308 HDAC8Q9BY41 377 aa16.04■□□□□ 0.16
TSSC4-208ENST00000467308 MUC3BQ9H195 1237 aa16.04■□□□□ 0.16
TSSC4-208ENST00000467308 FZD3Q9NPG1 666 aa16.04■□□□□ 0.16
TSSC4-208ENST00000467308 NCKIPSDQ9NZQ3 722 aa16.04■□□□□ 0.16
TSSC4-208ENST00000467308 COX16Q9P0S2 106 aa16.04■□□□□ 0.16
TSSC4-208ENST00000467308 SSUH2Q9Y2M2 353 aa16.04■□□□□ 0.16
TSSC4-208ENST00000467308 PCDHA13Q9Y5I0 950 aa16.04■□□□□ 0.16
TSSC4-208ENST00000467308 HS3ST3A1Q9Y663 406 aa16.04■□□□□ 0.16
TSSC4-208ENST00000467308 MAST4O15021 2626 aa16.04■□□□□ 0.16
TSSC4-208ENST00000467308 GOLGA6L9A6NEM1 432 aa16.03■□□□□ 0.16
TSSC4-208ENST00000467308 A6NNZ2 444 aa16.03■□□□□ 0.16
TSSC4-208ENST00000467308 K7ESM1 405 aa16.03■□□□□ 0.16
TSSC4-208ENST00000467308 UNGP13051 313 aaPredicted RBP16.03■□□□□ 0.16
TSSC4-208ENST00000467308 VAV2P52735 878 aa16.03■□□□□ 0.16
TSSC4-208ENST00000467308 CLDN2P57739 230 aa16.03■□□□□ 0.16
TSSC4-208ENST00000467308 TMEM259Q4ZIN3 620 aa16.03■□□□□ 0.16
TSSC4-208ENST00000467308 Q6ZSR6 202 aa16.03■□□□□ 0.16
TSSC4-208ENST00000467308 ERN2Q76MJ5 926 aaKnown RBP16.03■□□□□ 0.16
TSSC4-208ENST00000467308 ARRDC3Q96B67 414 aa16.03■□□□□ 0.16
TSSC4-208ENST00000467308 NOX5Q96PH1 765 aa16.03■□□□□ 0.16
TSSC4-208ENST00000467308 CPXM1Q96SM3 734 aa16.03■□□□□ 0.16
TSSC4-208ENST00000467308 PSMB7Q99436 277 aa16.03■□□□□ 0.16
TSSC4-208ENST00000467308 ZFR2Q9UPR6 939 aaKnown RBP16.03■□□□□ 0.16
TSSC4-208ENST00000467308 COL27A1Q8IZC6 1860 aaPredicted RBP16.02■□□□□ 0.16
TSSC4-208ENST00000467308 BTNL10A8MVZ5 291 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 PJA2O43164 708 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 KLK10O43240 276 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 PAGE1O75459 146 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 PCDH8O95206 1070 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 NOMO3P69849 1222 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 VAC14Q08AM6 782 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 ISXQ2M1V0 245 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 CCDC122Q5T0U0 273 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 TAF3Q5VWG9 929 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 SEL1L3Q68CR1 1132 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 ACAD10Q6JQN1 1059 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 ZCCHC8Q6NZY4 707 aaKnown RBP16.02■□□□□ 0.16
TSSC4-208ENST00000467308 KYAT3Q6YP21 454 aaKnown RBP16.02■□□□□ 0.16
TSSC4-208ENST00000467308 SETD3Q86TU7 594 aaPredicted RBP16.02■□□□□ 0.16
TSSC4-208ENST00000467308 DCAF4L2Q8NA75 395 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 TMEM35BQ8NCS4 154 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 ACRBPQ8NEB7 543 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 IFI44Q8TCB0 444 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 MAPK15Q8TD08 544 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 TTC9Q92623 222 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 PPP1R16AQ96I34 528 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 VCPIP1Q96JH7 1222 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 PPP1R13BQ96KQ4 1090 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 DESI2Q9BSY9 194 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 DNAJC28Q9NX36 388 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 IL36AQ9UHA7 158 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 VPS51Q9UID3 782 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 CSNK1G3Q9Y6M4 447 aa16.02■□□□□ 0.16
TSSC4-208ENST00000467308 DOCK4Q8N1I0 1966 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 SPTY2D1-AS1A0A0U1RR47 76 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 H3BM21 787 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 K7ERQ8 282 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 SNAP91O60641 907 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 CSF2P04141 144 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 RHOCP08134 193 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 MYF5P13349 255 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 NME1P15531 152 aaKnown RBP16.01■□□□□ 0.15
TSSC4-208ENST00000467308 RRM1P23921 792 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 MAGEA1P43355 309 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 RPS21P63220 83 aaKnown RBP16.01■□□□□ 0.15
TSSC4-208ENST00000467308 SKOR1P84550 965 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 NME3Q13232 169 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 TCEAL1Q15170 157 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 KIAA1161Q6NSJ0 714 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 OLFML1Q6UWY5 402 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 PTAR1Q7Z6K3 402 aaPredicted RBP16.01■□□□□ 0.15
TSSC4-208ENST00000467308 C14orf80Q86SX3 495 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 PARGQ86W56 976 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 PHF13Q86YI8 300 aaPredicted RBP16.01■□□□□ 0.15
TSSC4-208ENST00000467308 REXO1L1PQ8IX06 675 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 WDTC1Q8N5D0 677 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 ZNF548Q8NEK5 533 aaPredicted RBP16.01■□□□□ 0.15
TSSC4-208ENST00000467308 TPCN2Q8NHX9 752 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 CCDC97Q96F63 343 aaPredicted RBP16.01■□□□□ 0.15
TSSC4-208ENST00000467308 BMFQ96LC9 184 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 SLC46A1Q96NT5 459 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 SLC17A9Q9BYT1 436 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 TSGA10Q9BZW7 698 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 OSBPL2Q9H1P3 480 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 PDCL3Q9H2J4 239 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 SATB2Q9UPW6 733 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 RP1P56715 2156 aa16.01■□□□□ 0.15
TSSC4-208ENST00000467308 ANKRD62A6NC57 917 aa16■□□□□ 0.15
TSSC4-208ENST00000467308 B8ZZF3 427 aa16■□□□□ 0.15
TSSC4-208ENST00000467308 RNF103O00237 685 aa16■□□□□ 0.15
TSSC4-208ENST00000467308 SMAD6O43541 496 aaKnown RBP16■□□□□ 0.15
TSSC4-208ENST00000467308 DAB1O75553 588 aa16■□□□□ 0.15
TSSC4-208ENST00000467308 GRAP2O75791 330 aa16■□□□□ 0.15
TSSC4-208ENST00000467308 NEBLO76041 1014 aa16■□□□□ 0.15
TSSC4-208ENST00000467308 CNTN5O94779 1100 aa16■□□□□ 0.15
TSSC4-208ENST00000467308 FTLP02792 175 aaPredicted RBP16■□□□□ 0.15
TSSC4-208ENST00000467308 H2AFZP0C0S5 128 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms