RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 CCKBRP32239 447 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 CDH5P33151 784 aaPredicted RBP12.39□□□□□ -0.43
UBR4-211ENST00000467272 SCNN1AP37088 669 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 GABRB2P47870 512 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 RPIAP49247 311 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 SRSF6Q13247 344 aaKnown RBP12.39□□□□□ -0.43
UBR4-211ENST00000467272 MORC3Q14149 939 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 TGIF1Q15583 401 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 PRRT3Q5FWE3 981 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 MANEALQ5VSG8 457 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 RETSATQ6NUM9 610 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 LVRNQ6Q4G3 990 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 MACC1Q6ZN28 852 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 TFAP2DQ7Z6R9 452 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 DTX1Q86Y01 620 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 ZDHHC17Q8IUH5 632 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 TP53I13Q8NBR0 393 aaPredicted RBP12.39□□□□□ -0.43
UBR4-211ENST00000467272 C1orf131Q8NDD1 294 aaKnown RBP12.39□□□□□ -0.43
UBR4-211ENST00000467272 SMARCE1Q969G3 411 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 SGF29Q96ES7 293 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 CCDC34Q96HJ3 373 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 MBNL1Q9NR56 388 aaKnown RBP12.39□□□□□ -0.43
UBR4-211ENST00000467272 TMEM51Q9NW97 253 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 PPARGC1AQ9UBK2 798 aaKnown RBP12.39□□□□□ -0.43
UBR4-211ENST00000467272 APOBEC3BQ9UH17 382 aaKnown RBP12.39□□□□□ -0.43
UBR4-211ENST00000467272 ITM2BQ9Y287 266 aa12.39□□□□□ -0.43
UBR4-211ENST00000467272 NOTCH2Q04721 2471 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 CLEC18AA5D8T8 446 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 D6RAR5 112 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 GNA14O95837 355 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 F9P00740 461 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 WT1P19544 449 aaPredicted RBP12.38□□□□□ -0.43
UBR4-211ENST00000467272 SLC9A1P19634 815 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 OR1E1P30953 314 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 CLCN1P35523 988 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 PPP1R2P41236 205 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 GNA12Q03113 381 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 ZFP36L1Q07352 338 aaKnown RBP12.38□□□□□ -0.43
UBR4-211ENST00000467272 NFATC3Q12968 1075 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 SGCGQ13326 291 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 C1orf61Q13536 156 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 SPIDRQ14159 915 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 SLC25A52Q3SY17 297 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 ZNF805Q5CZA5 627 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 COLEC12Q5KU26 742 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 CLEC18BQ6UXF7 455 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 NLRP14Q86W24 1093 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 PASD1Q8IV76 773 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 ARL10Q8N8L6 244 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 CLEC18CQ8NCF0 446 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 NELFBQ8WX92 580 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 ARHGEF2Q92974 986 aaKnown RBP12.38□□□□□ -0.43
UBR4-211ENST00000467272 FAM81BQ96LP2 452 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 HAPLN3Q96S86 360 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 TBCBQ99426 244 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 SIX2Q9NPC8 291 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.38□□□□□ -0.43
UBR4-211ENST00000467272 HECAQ9UBI9 543 aaPredicted RBP12.38□□□□□ -0.43
UBR4-211ENST00000467272 AJAP1Q9UKB5 411 aaPredicted RBP12.38□□□□□ -0.43
UBR4-211ENST00000467272 FCF1Q9Y324 198 aaKnown RBP12.38□□□□□ -0.43
UBR4-211ENST00000467272 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.38□□□□□ -0.43
UBR4-211ENST00000467272 MYO9AB2RTY4 2548 aa12.38□□□□□ -0.43
UBR4-211ENST00000467272 SPTAN1Q13813 2472 aaKnown RBP12.37□□□□□ -0.43
UBR4-211ENST00000467272 TMX2-CTNND1H3BSU7 103 aa12.37□□□□□ -0.43
UBR4-211ENST00000467272 GSRP00390 522 aa12.37□□□□□ -0.43
UBR4-211ENST00000467272 GKP32189 559 aa12.37□□□□□ -0.43
UBR4-211ENST00000467272 RECQLP46063 649 aaPredicted RBP12.37□□□□□ -0.43
UBR4-211ENST00000467272 NRG1Q02297 640 aaPredicted RBP12.37□□□□□ -0.43
UBR4-211ENST00000467272 PTK2BQ14289 1009 aa12.37□□□□□ -0.43
UBR4-211ENST00000467272 ZSCAN23Q3MJ62 389 aa12.37□□□□□ -0.43
UBR4-211ENST00000467272 LRRC31Q6UY01 552 aa12.37□□□□□ -0.43
UBR4-211ENST00000467272 NYAP1Q6ZVC0 841 aa12.37□□□□□ -0.43
UBR4-211ENST00000467272 RAB11FIP2Q7L804 512 aa12.37□□□□□ -0.43
UBR4-211ENST00000467272 ARCQ7LC44 396 aa12.37□□□□□ -0.43
UBR4-211ENST00000467272 PRICKLE2Q7Z3G6 844 aa12.37□□□□□ -0.43
UBR4-211ENST00000467272 SDR16C5Q8N3Y7 309 aa12.37□□□□□ -0.43
UBR4-211ENST00000467272 FSTL5Q8N475 847 aaPredicted RBP12.37□□□□□ -0.43
UBR4-211ENST00000467272 KYQ8NBH2 561 aa12.37□□□□□ -0.43
UBR4-211ENST00000467272 EXTL1Q92935 676 aa12.37□□□□□ -0.43
UBR4-211ENST00000467272 GLMNQ92990 594 aa12.37□□□□□ -0.43
UBR4-211ENST00000467272 ATP13A1Q9HD20 1204 aa12.37□□□□□ -0.43
UBR4-211ENST00000467272 NDFIP2Q9NV92 336 aa12.37□□□□□ -0.43
UBR4-211ENST00000467272 APEX2Q9UBZ4 518 aa12.37□□□□□ -0.43
UBR4-211ENST00000467272 IPO11Q9UI26 975 aaKnown RBP12.37□□□□□ -0.43
UBR4-211ENST00000467272 TMEM59LQ9UK28 342 aa12.37□□□□□ -0.43
UBR4-211ENST00000467272 ATP6V1DQ9Y5K8 247 aa12.37□□□□□ -0.43
UBR4-211ENST00000467272 NBASA2RRP1 2371 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 CHD5Q8TDI0 1954 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 GTPBP10A4D1E9 387 aaKnown RBP12.36□□□□□ -0.43
UBR4-211ENST00000467272 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.36□□□□□ -0.43
UBR4-211ENST00000467272 GJB6O95452 261 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 ANXA6P08133 673 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 LIPCP11150 499 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 FLT3P36888 993 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 ACVRL1P37023 503 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 EIF4A3P38919 411 aaKnown RBP12.36□□□□□ -0.43
UBR4-211ENST00000467272 PEX5P50542 639 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 HK3P52790 923 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 CCL7P80098 99 aa12.36□□□□□ -0.43
UBR4-211ENST00000467272 NFKB2Q00653 900 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms