RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 EIF2AQ9BY44 585 aaKnown RBP13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 ELP3Q9H9T3 547 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 PLEKHA5Q9HAU0 1116 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 GTSE1Q9NYZ3 720 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 FAM155AB1AL88 458 aaPredicted RBP13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 CLDN5O00501 218 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 FYNP06241 537 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 HOXA11P31270 313 aaPredicted RBP13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 RAB10P61026 200 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 CTBSQ01459 385 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 PPP1R3AQ16821 1122 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 NHSL2Q5HYW2 709 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 KRT80Q6KB66 452 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 DHRS4L2Q6PKH6 230 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 TRIM67Q6ZTA4 783 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 BEST2Q8NFU1 509 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 FNDC8Q8TC99 324 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 FTHL17Q9BXU8 183 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 ANKRD60Q9BZ19 345 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 POMKQ9H5K3 350 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 LRRC4Q9HBW1 653 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 PPP2R3BQ9Y5P8 575 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 SQORQ9Y6N5 450 aa13.13□□□□□ -0.31
PDZRN3-205ENST00000466780 TPI1P60174 286 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 C1QTNF8P60827 252 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 TUBA4AP68366 448 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 ARHGAP1Q07960 439 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 CDH17Q12864 832 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 TRAP1Q12931 704 aaKnown RBP13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 STX5Q13190 355 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 FASTKQ14296 549 aaKnown RBP13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 AGKQ53H12 422 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 ZNF280DQ6N043 979 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 HDAC11Q96DB2 347 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 SLC2A13Q96QE2 648 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 PAPPA2Q9BXP8 1791 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 MRPL46Q9H2W6 279 aaKnown RBP13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 WDR6Q9NNW5 1121 aaKnown RBP13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 TXNRD2Q9NNW7 524 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 LTBP3Q9NS15 1303 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 NSMCE4AQ9NXX6 385 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 CCDC167Q9P0B6 97 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 TRHDEQ9UKU6 1024 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 STAP1Q9ULZ2 295 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 POLR2AP24928 1970 aaKnown RBP13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 DNAJC25-GNG10A0A024R161 153 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 FAM95CA0A1B0GW59 222 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 PSMD12O00232 456 aaPredicted RBP13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 SOCS2O14508 198 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 TIPRLO75663 272 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 BMP10O95393 424 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 FBXO47Q5MNV8 452 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 RPS27LQ71UM5 84 aaKnown RBP13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 PDZD4Q76G19 769 aaPredicted RBP13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 OTOP3Q7RTS5 596 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 PIWIL4Q7Z3Z4 852 aaKnown RBP13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 FAM47BQ8NA70 645 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 HM13Q8TCT9 377 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 SNRNP27Q8WVK2 155 aaKnown RBP13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 DPF3Q92784 378 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 TEKT5Q96M29 485 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 MPHOSPH6Q99547 160 aaKnown RBP13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 SNX25Q9H3E2 840 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 SPAG4Q9NPE6 437 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 MRPL40Q9NQ50 206 aaKnown RBP13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 NCKIPSDQ9NZQ3 722 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 SNX10Q9Y5X0 201 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 TLL2Q9Y6L7 1015 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 CROCCQ5TZA2 2017 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 RALGAPA2Q2PPJ7 1873 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 ADM5C9JUS6 153 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 PIRO00625 290 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 NRP1O14786 923 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 JCHAINP01591 159 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 ZNF286BP0CG31 522 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 KCNA5P22460 613 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 DNAJB1P25685 340 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 ARNTP27540 789 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 RABGGTBP53611 331 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 TAS2R39P59534 338 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 GALNT2Q10471 571 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 SQLEQ14534 574 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 DCAF4L1Q3SXM0 396 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 ITPRIPL1Q6GPH6 555 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 LAYNQ6UX15 382 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 OSTM1Q86WC4 334 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 CNTN4Q8IWV2 1026 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 BBS5Q8N3I7 341 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 HEXDCQ8WVB3 486 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 TFAP2CQ92754 450 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 PLEKHG4BQ96PX9 1271 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 DUSP16Q9BY84 665 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 CLK4Q9HAZ1 481 aaKnown RBP13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 TMEM181Q9P2C4 612 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 EBF1Q9UH73 591 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 RAD54BQ9Y620 910 aa13.12□□□□□ -0.31
PDZRN3-205ENST00000466780 ZNF839A8K0R7 811 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 DLGAP1O14490 977 aa13.11□□□□□ -0.31
PDZRN3-205ENST00000466780 NCAM2O15394 837 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms