RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 ZNF189O75820 626 aaPredicted RBP17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 TMCC1O94876 653 aa17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 IFNB1P01574 187 aa17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 SRPRAP08240 638 aaKnown RBP17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 ETS1P14921 441 aa17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 KIR2DL1P43626 348 aaPredicted RBP17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 MMP13P45452 471 aa17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 VASPP50552 380 aaPredicted RBP17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 ZNF852Q6ZMS4 543 aa17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 PRUNE1Q86TP1 453 aa17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 ZNF567Q8N184 647 aa17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 UCMAQ8WVF2 138 aa17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 TEKT5Q96M29 485 aa17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 TTC25Q96NG3 672 aa17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 SERPINB12Q96P63 405 aa17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 VAT1Q99536 393 aa17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 NINJ2Q9NZG7 142 aa17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 NOVA2Q9UNW9 492 aaKnown RBP17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 FCF1Q9Y324 198 aaKnown RBP17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 SHROOM3Q8TF72 1996 aa17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 RASGRF2O14827 1237 aa17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 MUSKO15146 869 aa17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 ATP9BO43861 1147 aa17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 ZNF821O75541 412 aaPredicted RBP17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 GCATO75600 419 aa17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 ZSCAN5DPP0CG00 497 aa17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 CHRM1P11229 460 aaPredicted RBP17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 STARD6P59095 220 aa17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 PPP2R2AP63151 447 aa17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 ZNF234Q14588 700 aa17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 DLG2Q15700 870 aa17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 DGKKQ5KSL6 1271 aa17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 EGFLAMQ63HQ2 1017 aa17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 PPIL6Q8IXY8 311 aa17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 SIX5Q8N196 739 aa17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 ZNF687Q8N1G0 1237 aa17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 PGBD5Q8N414 524 aa17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 CCDC110Q8TBZ0 833 aa17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 SHDQ96IW2 340 aa17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 AGAP3Q96P47 875 aa17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 PSKH2Q96QS6 385 aa17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 RBM15Q96T37 977 aaKnown RBP eCLIP17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 UHRF1Q96T88 793 aaPredicted RBP17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 CNOT10Q9H9A5 744 aaKnown RBP17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 THAP10Q9P2Z0 257 aaPredicted RBP17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 SEPT3Q9UH03 358 aa17.16■□□□□ 0.34
EXOSC3-203ENST00000465229 TTC34A8MYJ7 566 aa17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 EIF3HO15372 352 aaKnown RBP eCLIP17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 RGS16O15492 202 aaPredicted RBP17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 ZBTB24O43167 697 aaPredicted RBP17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 STK10O94804 968 aaKnown RBP17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 IVLP07476 585 aa17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 HNRNPLP14866 589 aaKnown RBP eCLIP17.15■□□□□ 0.341e-7■■□□□ 14
EXOSC3-203ENST00000465229 CD68P34810 354 aaPredicted RBP17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 NNMTP40261 264 aa17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 MDH1P40925 334 aaKnown RBP17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 MAGEA4P43358 317 aa17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 GNGT1P63211 74 aa17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 ZXDAP98168 799 aa17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 CBLBQ13191 982 aa17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 CCINQ13939 588 aa17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 ANKRD20A2Q5SQ80 823 aa17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 ANKRD20A1Q5TYW2 823 aa17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 ANKRD20A3Q5VUR7 823 aa17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 PID1Q7Z2X4 250 aa17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 METTL3Q86U44 580 aaKnown RBP17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 KDM1BQ8NB78 822 aa17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 FRS2Q8WU20 508 aa17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 PRCCQ92733 491 aaPredicted RBP17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 SPATA13Q96N96 652 aa17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 ACOX2Q99424 681 aa17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 NT5MQ9NPB1 228 aa17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 ZDHHC4Q9NPG8 344 aa17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 BCCIPQ9P287 314 aaKnown RBP eCLIP17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 TRHDEQ9UKU6 1024 aa17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 NDRG2Q9UN36 371 aaKnown RBP17.15■□□□□ 0.34
EXOSC3-203ENST00000465229 ALOX15BO15296 676 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 HLA-DQB2P05538 268 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 RPL22P35268 128 aaKnown RBP17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 SEC13P55735 322 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 MAGOHP61326 146 aaKnown RBP17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 ST8SIA6P61647 398 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 ZNF235Q14590 738 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 STAT4Q14765 748 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 KYNUQ16719 465 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 ACCSLQ4AC99 568 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 DNAJC21Q5F1R6 531 aaKnown RBP17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 C4orf22Q6V702 233 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 ISG20Q96AZ6 181 aaKnown RBP17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 CCDC77Q9BR77 488 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 CINPQ9BW66 212 aaPredicted RBP17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 CEP44Q9C0F1 390 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 TMEM245Q9H330 911 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 KLHL8Q9P2G9 620 aaPredicted RBP17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 LHX3Q9UBR4 397 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 WASH3PC4AMC7 463 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 OPHN1O60890 802 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 NEBLO76041 1014 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 ACSL3O95573 720 aa17.14■□□□□ 0.33
EXOSC3-203ENST00000465229 TIE1P35590 1138 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms