RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 TBC1D3EA0A087X179 549 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 TBC1D3KA0A087X1G2 549 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 TBC1D3FA6NER0 549 aaPredicted RBP14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 TBC1D3LB9A6J9 549 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 MUSKO15146 869 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 PLRG1O43660 514 aaKnown RBP14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 LRP3O75074 770 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 UGT2B4P06133 528 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 TBC1D3HP0C7X1 549 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 TGM2P21980 687 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 HSPA9P38646 679 aaKnown RBP14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 MPLP40238 635 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 CETN2P41208 172 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 DPP6P42658 865 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 MMP13P45452 471 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 NR2C2P49116 596 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 SCNN1BP51168 640 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 ADCY2Q08462 1091 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 SPEM2Q0P670 501 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 GRM3Q14832 879 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 PDK1Q15118 436 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 WDR45BQ5MNZ6 344 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 PIP5KL1Q5T9C9 394 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 TBC1D3GQ6DHY5 549 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 TBC1D3CQ6IPX1 549 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 FBXL19Q6PCT2 694 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 NPNTQ6UXI9 565 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 SYT12Q8IV01 421 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 CCDC13Q8IYE1 715 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 TBC1D3Q8IZP1 549 aaPredicted RBP14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 TEX26Q8N6G2 289 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 LRRN4Q8WUT4 740 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 UBE2Q2Q8WVN8 375 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 MAML1Q92585 1016 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 ALG3Q92685 438 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 KLHL32Q96NJ5 620 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 LGMNQ99538 433 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 HEMGNQ9BXL5 484 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 KCNF1Q9H3M0 494 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 TMEM74BQ9NUR3 256 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 PILRBQ9UKJ0 227 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 EFR3BQ9Y2G0 817 aa14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 TNRC6BQ9UPQ9 1833 aaKnown RBP14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 PTPRZ1P23471 2315 aaPredicted RBP14.7□□□□□ -0.06
SQSTM1-205ENST00000464493 C16orf96A6NNT2 1141 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 MEI4A8MW99 385 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 PPP1R12AO14974 1030 aaPredicted RBP14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 DDX3YO15523 660 aaKnown RBP14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 FSBPO95073 299 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 PYGMP11217 842 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 CCNB1P14635 433 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 MAOBP27338 520 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 MAPK8P45983 427 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 NEK3P51956 506 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 TAS2R38P59533 333 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 PPIDQ08752 370 aaKnown RBP14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 AP1B1Q10567 949 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 CCDC6Q16204 474 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 PLA2G2CQ5R387 149 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 KIAA0895LQ68EN5 471 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 PGBD5Q8N414 524 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 DNASE2BQ8WZ79 361 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 P3H4Q92791 437 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 BIRC7Q96CA5 298 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 HES6Q96HZ4 224 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 ZNF641Q96N77 438 aaPredicted RBP14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 OLFM3Q96PB7 478 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 ALS2CR12Q96Q35 445 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 TUBGCP5Q96RT8 1024 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 MGME1Q9BQP7 344 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 OSBPL8Q9BZF1 889 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 BRD8Q9H0E9 1235 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 SUV39H2Q9H5I1 410 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 ATP13A3Q9H7F0 1226 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 NT5MQ9NPB1 228 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 VPS45Q9NRW7 570 aa14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 SAE1Q9UBE0 346 aaPredicted RBP14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.69□□□□□ -0.06
SQSTM1-205ENST00000464493 TTC24A2A3L6 582 aaPredicted RBP14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 PIGNO95427 931 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 IGHV4-34P06331 123 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 ZNF806P0C7X5 589 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 ADRB3P13945 408 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 TGM1P22735 817 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 PTPN7P35236 360 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 HOXD12P35452 270 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 MAXP61244 160 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 AP1S1P61966 158 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 ITKQ08881 620 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 CSRP2Q16527 193 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 BBS12Q6ZW61 710 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 PARS2Q7L3T8 475 aaKnown RBP14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 TTC7BQ86TV6 843 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 CAMK1DQ8IU85 385 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 GPR161Q8N6U8 529 aaKnown RBP14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 HCAR2Q8TDS4 363 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 SNX19Q92543 992 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 RAB7BQ96AH8 199 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 NUDCD1Q96RS6 583 aa14.68□□□□□ -0.06
SQSTM1-205ENST00000464493 PREBQ9HCU5 417 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms