RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 AKR1B15C9JRZ8 316 aaPredicted RBP13.15□□□□□ -0.3
XRN1-203ENST00000463916 H3BRJ5 948 aa13.15□□□□□ -0.3
XRN1-203ENST00000463916 PROSCO94903 275 aa13.15□□□□□ -0.3
XRN1-203ENST00000463916 ITIH2P19823 946 aa13.15□□□□□ -0.3
XRN1-203ENST00000463916 SSR1P43307 286 aaKnown RBP13.15□□□□□ -0.3
XRN1-203ENST00000463916 ARSEP51690 589 aa13.15□□□□□ -0.3
XRN1-203ENST00000463916 ZNF135P52742 658 aaPredicted RBP13.15□□□□□ -0.3
XRN1-203ENST00000463916 C21orf59P57076 290 aa13.15□□□□□ -0.3
XRN1-203ENST00000463916 IL9RQ01113 521 aa13.15□□□□□ -0.3
XRN1-203ENST00000463916 FGL2Q14314 439 aa13.15□□□□□ -0.3
XRN1-203ENST00000463916 TMEM259Q4ZIN3 620 aa13.15□□□□□ -0.3
XRN1-203ENST00000463916 NAPEPLDQ6IQ20 393 aa13.15□□□□□ -0.3
XRN1-203ENST00000463916 GDPD4Q6W3E5 623 aa13.15□□□□□ -0.3
XRN1-203ENST00000463916 DBX2Q6ZNG2 339 aa13.15□□□□□ -0.3
XRN1-203ENST00000463916 HORMAD1Q86X24 394 aa13.15□□□□□ -0.3
XRN1-203ENST00000463916 SPATS2Q86XZ4 545 aaKnown RBP13.15□□□□□ -0.3
XRN1-203ENST00000463916 NAXDQ8IW45 347 aa13.15□□□□□ -0.3
XRN1-203ENST00000463916 TMEM145Q8NBT3 493 aa13.15□□□□□ -0.3
XRN1-203ENST00000463916 TSEN2Q8NCE0 465 aaKnown RBP13.15□□□□□ -0.3
XRN1-203ENST00000463916 CCDC42Q96M95 316 aa13.15□□□□□ -0.3
XRN1-203ENST00000463916 UVRAGQ9P2Y5 699 aa13.15□□□□□ -0.3
XRN1-203ENST00000463916 BTBD3Q9Y2F9 522 aa13.15□□□□□ -0.3
XRN1-203ENST00000463916 TLR4O00206 839 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 MUSKO15146 869 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 BUB1BO60566 1050 aaPredicted RBP13.14□□□□□ -0.31
XRN1-203ENST00000463916 CBFA2T3O75081 653 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 TOP3BO95985 862 aaKnown RBP13.14□□□□□ -0.31
XRN1-203ENST00000463916 TMEM253P0C7T8 217 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 ZNF883P0CG24 379 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 ARL4AP40617 200 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 CCDC15Q0P6D6 951 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 SHBQ15464 509 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 ZNF423Q2M1K9 1284 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 SETMARQ53H47 684 aaPredicted RBP13.14□□□□□ -0.31
XRN1-203ENST00000463916 CNGA4Q8IV77 575 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 MFSD2AQ8NA29 543 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 SLC35G2Q8TBE7 412 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 FAM71BQ8TC56 605 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 NSMCE3Q96MG7 304 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 SLC32A1Q9H598 525 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 CAAP1Q9H8G2 361 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 KLHL11Q9NVR0 708 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 IPO11Q9UI26 975 aaKnown RBP13.14□□□□□ -0.31
XRN1-203ENST00000463916 TPX2Q9ULW0 747 aaKnown RBP13.14□□□□□ -0.31
XRN1-203ENST00000463916 DMTF1Q9Y222 760 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 TP53BP1Q12888 1972 aaPredicted RBP13.14□□□□□ -0.31
XRN1-203ENST00000463916 PRAMEF26H0Y7S4 382 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 PALMO75781 387 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 PIGNO95427 931 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 IGSF6O95976 241 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 PMLP29590 882 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 GJC1P36383 396 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 CDH6P55285 790 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 NXPH1P58417 271 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 SIM1P81133 766 aaPredicted RBP13.14□□□□□ -0.31
XRN1-203ENST00000463916 OSBPL1AQ9BXW6 950 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 PCOLCE2Q9UKZ9 415 aa13.14□□□□□ -0.31
XRN1-203ENST00000463916 TRPM6Q9BX84 2022 aa13.13□□□□□ -0.31
XRN1-203ENST00000463916 IGLON5A6NGN9 336 aa13.13□□□□□ -0.31
XRN1-203ENST00000463916 RAD51BO15315 384 aa13.13□□□□□ -0.31
XRN1-203ENST00000463916 AP1G1O43747 822 aa13.13□□□□□ -0.31
XRN1-203ENST00000463916 PEX11BO96011 259 aa13.13□□□□□ -0.31
XRN1-203ENST00000463916 PAK4O96013 591 aaPredicted RBP13.13□□□□□ -0.31
XRN1-203ENST00000463916 TIMP2P16035 220 aa13.13□□□□□ -0.31
XRN1-203ENST00000463916 CLDN2P57739 230 aa13.13□□□□□ -0.31
XRN1-203ENST00000463916 IL10RBQ08334 325 aa13.13□□□□□ -0.31
XRN1-203ENST00000463916 SLC10A7Q0GE19 358 aa13.13□□□□□ -0.31
XRN1-203ENST00000463916 DPYSL3Q14195 570 aa13.13□□□□□ -0.31
XRN1-203ENST00000463916 STAT4Q14765 748 aa13.13□□□□□ -0.31
XRN1-203ENST00000463916 TMCO3Q6UWJ1 677 aa13.13□□□□□ -0.31
XRN1-203ENST00000463916 TTC7BQ86TV6 843 aa13.13□□□□□ -0.31
XRN1-203ENST00000463916 LZTR1Q8N653 840 aa13.13□□□□□ -0.31
XRN1-203ENST00000463916 SETD7Q8WTS6 366 aaKnown RBP13.13□□□□□ -0.31
XRN1-203ENST00000463916 ELF4Q99607 663 aaPredicted RBP13.13□□□□□ -0.31
XRN1-203ENST00000463916 CPEB1Q9BZB8 566 aaKnown RBP13.13□□□□□ -0.31
XRN1-203ENST00000463916 WASF3Q9UPY6 502 aa13.13□□□□□ -0.31
XRN1-203ENST00000463916 FREM2Q5SZK8 3169 aa13.13□□□□□ -0.31
XRN1-203ENST00000463916 A0A1B0GTQ1 180 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 TTC24A2A3L6 582 aaPredicted RBP13.12□□□□□ -0.31
XRN1-203ENST00000463916 TMEM110-MUSTN1A8MSY1 372 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 AREL1O15033 823 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 NUDT1P36639 197 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 ZNF75DP51815 510 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 RPS21P63220 83 aaKnown RBP13.12□□□□□ -0.31
XRN1-203ENST00000463916 KRT81Q14533 505 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 MESDQ14696 234 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 TRIP6Q15654 476 aaKnown RBP13.12□□□□□ -0.31
XRN1-203ENST00000463916 KDM7AQ6ZMT4 941 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 ZSWIM9Q86XI8 627 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 GATAD2AQ86YP4 633 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 CAMK1DQ8IU85 385 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 FEM1CQ96JP0 617 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 SLC17A9Q9BYT1 436 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 SP110Q9HB58 689 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 MAFKO60675 156 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 SPINK2P20155 84 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 HNRNPA2B1P22626 353 aaKnown RBP13.12□□□□□ -0.31
XRN1-203ENST00000463916 RAD51Q06609 339 aa13.12□□□□□ -0.31
XRN1-203ENST00000463916 HADHQ16836 314 aaKnown RBP13.12□□□□□ -0.31
XRN1-203ENST00000463916 GCNT7Q6ZNI0 430 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms