RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 FSTL5Q8N475 847 aaPredicted RBP14.71□□□□□ -0.05
SMC1A-204ENST00000463684 WDTC1Q8N5D0 677 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 OR6C4Q8NGE1 309 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 SMARCE1Q969G3 411 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 CCDC74AQ96AQ1 378 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 CENPTQ96BT3 561 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 DHTKD1Q96HY7 919 aaPredicted RBP14.71□□□□□ -0.05
SMC1A-204ENST00000463684 C1orf74Q96LT6 269 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 C1QTNF7Q9BXJ2 289 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 FOXP3Q9BZS1 431 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 SYNCQ9H7C4 482 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 ATP13A1Q9HD20 1204 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 ACP6Q9NPH0 428 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 PIGVQ9NUD9 493 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 SIRPGQ9P1W8 387 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 PISDQ9UG56 409 aa14.71□□□□□ -0.05
SMC1A-204ENST00000463684 D6RAR5 112 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 SRGAP2O75044 1071 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 F9P00740 461 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 RPLP0P05388 317 aaKnown RBP14.7□□□□□ -0.06
SMC1A-204ENST00000463684 CCKBRP32239 447 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 EIF4A3P38919 411 aaKnown RBP14.7□□□□□ -0.06
SMC1A-204ENST00000463684 SLC6A3Q01959 620 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 ZNF805Q5CZA5 627 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 OLFML1Q6UWY5 402 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 MACC1Q6ZN28 852 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 SLC26A9Q7LBE3 791 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 VPS36Q86VN1 386 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 PASD1Q8IV76 773 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 PLPP6Q8IY26 295 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 ZNF683Q8IZ20 524 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 SDR16C5Q8N3Y7 309 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 FAM81BQ96LP2 452 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 CPEB1Q9BZB8 566 aaKnown RBP14.7□□□□□ -0.06
SMC1A-204ENST00000463684 SLC25A18Q9H1K4 315 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 TMEM51Q9NW97 253 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 ANKMY1Q9P2S6 941 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 GGT7Q9UJ14 662 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 STAP1Q9ULZ2 295 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 FCF1Q9Y324 198 aaKnown RBP14.7□□□□□ -0.06
SMC1A-204ENST00000463684 ATP6V1DQ9Y5K8 247 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 SNX10Q9Y5X0 201 aa14.7□□□□□ -0.06
SMC1A-204ENST00000463684 UBR5O95071 2799 aaPredicted RBP14.7□□□□□ -0.06
SMC1A-204ENST00000463684 ZMPSTE24O75844 475 aa14.69□□□□□ -0.06
SMC1A-204ENST00000463684 TM7SF2O76062 418 aa14.69□□□□□ -0.06
SMC1A-204ENST00000463684 PPP1R2P41236 205 aa14.69□□□□□ -0.06
SMC1A-204ENST00000463684 ABL2P42684 1182 aa14.69□□□□□ -0.06
SMC1A-204ENST00000463684 SULT1E1P49888 294 aa14.69□□□□□ -0.06
SMC1A-204ENST00000463684 RNASE9P60153 205 aaKnown RBP14.69□□□□□ -0.06
SMC1A-204ENST00000463684 TLE1Q04724 770 aa14.69□□□□□ -0.06
SMC1A-204ENST00000463684 DEUP1Q05D60 604 aa14.69□□□□□ -0.06
SMC1A-204ENST00000463684 TTC7BQ86TV6 843 aa14.69□□□□□ -0.06
SMC1A-204ENST00000463684 GKN2Q86XP6 184 aa14.69□□□□□ -0.06
SMC1A-204ENST00000463684 ISG20Q96AZ6 181 aaKnown RBP14.69□□□□□ -0.06
SMC1A-204ENST00000463684 TMEM159Q96B96 161 aa14.69□□□□□ -0.06
SMC1A-204ENST00000463684 NPY6RQ99463 290 aa14.69□□□□□ -0.06
SMC1A-204ENST00000463684 TM6SF2Q9BZW4 377 aa14.69□□□□□ -0.06
SMC1A-204ENST00000463684 LRRN3Q9H3W5 708 aa14.69□□□□□ -0.06
SMC1A-204ENST00000463684 ANLNQ9NQW6 1124 aa14.69□□□□□ -0.06
SMC1A-204ENST00000463684 GEMIN8Q9NWZ8 242 aaKnown RBP14.69□□□□□ -0.06
SMC1A-204ENST00000463684 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.69□□□□□ -0.068e-9■□□□□ 8.4
SMC1A-204ENST00000463684 RABGEF1Q9UJ41 708 aa14.69□□□□□ -0.06
SMC1A-204ENST00000463684 HOOK1Q9UJC3 728 aaKnown RBP14.69□□□□□ -0.06
SMC1A-204ENST00000463684 PNMA8BQ9ULN7 279 aaPredicted RBP14.69□□□□□ -0.06
SMC1A-204ENST00000463684 GPR34Q9UPC5 381 aa14.69□□□□□ -0.06
SMC1A-204ENST00000463684 ITM2BQ9Y287 266 aa14.69□□□□□ -0.06
SMC1A-204ENST00000463684 LOXL2Q9Y4K0 774 aa14.69□□□□□ -0.06
SMC1A-204ENST00000463684 PCDHGA4Q9Y5G9 962 aa14.69□□□□□ -0.06
SMC1A-204ENST00000463684 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.69□□□□□ -0.065e-7■■□□□ 12.9
SMC1A-204ENST00000463684 COL27A1Q8IZC6 1860 aaPredicted RBP14.69□□□□□ -0.06
SMC1A-204ENST00000463684 IGLV3-10A0A075B6K4 115 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 A0A1W2PQM1 296 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 TMEM110-MUSTN1A8MSY1 372 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 KRIT1O00522 736 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 GNA14O95837 355 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 ERBB2P04626 1255 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 CELA2BP08218 269 aaPredicted RBP14.68□□□□□ -0.06
SMC1A-204ENST00000463684 GKP32189 559 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 KRT9P35527 623 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 IGFALSP35858 605 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 HK3P52790 923 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 ARF5P84085 180 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 GNA12Q03113 381 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 UBAP2LQ14157 1087 aaKnown RBP14.68□□□□□ -0.06
SMC1A-204ENST00000463684 POLD3Q15054 466 aaPredicted RBP14.68□□□□□ -0.06
SMC1A-204ENST00000463684 ISM2Q6H9L7 571 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 VASH2Q86V25 355 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 ZDHHC17Q8IUH5 632 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 HID1Q8IV36 788 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 TRIM59Q8IWR1 403 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 KYQ8NBH2 561 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 ZNF397Q8NF99 534 aaPredicted RBP14.68□□□□□ -0.06
SMC1A-204ENST00000463684 PCDH19Q8TAB3 1148 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 SPATA20Q8TB22 786 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 CXorf40AQ8TE69 158 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 OSBPL1AQ9BXW6 950 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 EDEM3Q9BZQ6 932 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 ZYG11BQ9C0D3 744 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 PCDHGC3Q9UN70 934 aa14.68□□□□□ -0.06
SMC1A-204ENST00000463684 TRPM6Q9BX84 2022 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms