RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 GOLGA8IPA6NC78 632 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 GOLGA8JA6NMD2 632 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 CCDC169A6NNP5 214 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 TAF4O00268 1085 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 PJA2O43164 708 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 GPR39O43194 453 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 FAM189A1O60320 539 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 TBCAO75347 108 aaKnown RBP3.86□□□□□ -1.79
SCFD1-204ENST00000463622 ECI2O75521 394 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 KCNK5O95279 499 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 URODP06132 367 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 ADRB2P07550 413 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 MTHFD2P13995 350 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 HOXA9P31269 272 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 HOXA11P31270 313 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-204ENST00000463622 CXCL12P48061 93 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 SLC6A9P48067 706 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 GLUD2P49448 558 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 CLK3P49761 638 aaKnown RBP3.86□□□□□ -1.79
SCFD1-204ENST00000463622 RAB27AP51159 221 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 GTF2BQ00403 316 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 RNASELQ05823 741 aaKnown RBP3.86□□□□□ -1.79
SCFD1-204ENST00000463622 DSC1Q08554 894 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 MALLQ13021 153 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 SIM2Q14190 667 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-204ENST00000463622 LPAL2Q16609 132 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 STX1AQ16623 288 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 STPG1Q5TH74 334 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 B3GNTL1Q67FW5 361 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-204ENST00000463622 IL31Q6EBC2 164 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 RTL10Q7L3V2 364 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 GET4Q7L5D6 327 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-204ENST00000463622 APTXQ7Z2E3 356 aaKnown RBP3.86□□□□□ -1.79
SCFD1-204ENST00000463622 GRASPQ7Z6J2 395 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-204ENST00000463622 PALB2Q86YC2 1186 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 CCDC65Q8IXS2 484 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 MCPH1Q8NEM0 835 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 NELFBQ8WX92 580 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 RAB24Q969Q5 203 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 CCDC43Q96MW1 224 aaKnown RBP3.86□□□□□ -1.79
SCFD1-204ENST00000463622 GSDMAQ96QA5 445 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 PYM1Q9BRP8 204 aaKnown RBP3.86□□□□□ -1.79
SCFD1-204ENST00000463622 PLA2G2FQ9BZM2 168 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 MRPL44Q9H9J2 332 aaKnown RBP3.86□□□□□ -1.79
SCFD1-204ENST00000463622 KMT5AQ9NQR1 393 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 OLFML3Q9NRN5 406 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 INTS13Q9NVM9 706 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 F5P12259 2224 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 KIAA1671Q9BY89 1806 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 PTPRJQ12913 1337 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 CNTNAP2Q9UHC6 1331 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 PCSK5Q92824 1860 aa3.86□□□□□ -1.79
SCFD1-204ENST00000463622 PIPSLA2A3N6 862 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 MARCH11A6NNE9 402 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 K7ESF4 209 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 TSPAN1O60635 241 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 DKC1O60832 514 aaKnown RBP eCLIP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 SMC2O95347 1197 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 CFIP05156 583 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 CHRNB1P11230 501 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 GAP43P17677 238 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 ARF4P18085 180 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 PTMSP20962 102 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 TNFSF9P41273 254 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 NAMPTP43490 491 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 CCR3P51677 355 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 SEC24CP53992 1094 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 PTENP60484 403 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 NTHL1P78549 312 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 HSD11B2P80365 405 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 AMPD3Q01432 767 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 OCA2Q04671 838 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 DMP1Q13316 513 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 SP140Q13342 867 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 C1orf220Q5T0J3 134 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 L1TD1Q5T7N2 865 aaKnown RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 TWF2Q6IBS0 349 aaKnown RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 CENPPQ6IPU0 288 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 SASS6Q6UVJ0 657 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 CRELD2Q6UXH1 353 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 TPRG1Q6ZUI0 275 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 ZNF410Q86VK4 478 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 LONP2Q86WA8 852 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 RHOT2Q8IXI1 618 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 ZC3H3Q8IXZ2 948 aaKnown RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 TMEM132CQ8N3T6 1108 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 GUF1Q8N442 669 aaKnown RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 SPEM1Q8N4L4 309 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 ATL2Q8NHH9 583 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 ITFG1Q8TB96 612 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 URGCPQ8TCY9 931 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 PSPC1Q8WXF1 523 aaKnown RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 KIFAP3Q92845 792 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 DNASE1L2Q92874 299 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 SAAL1Q96ER3 474 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 NTPCRQ9BSD7 190 aaKnown RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 EIF2AQ9BY44 585 aaKnown RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 ALOXE3Q9BYJ1 711 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 INO80BQ9C086 356 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 FZD8Q9H461 694 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms