RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 TMEM206Q9H813 350 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 PNPLA8Q9NP80 782 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 TRNAU1APQ9NX07 287 aaKnown RBP8.81□□□□□ -1
SHQ1-203ENST00000463369 KCTD5Q9NXV2 234 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 HSPBP1Q9NZL4 362 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 IFT80Q9P2H3 777 aaPredicted RBP8.81□□□□□ -1
SHQ1-203ENST00000463369 EPS15L1Q9UBC2 864 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 EBF1Q9UH73 591 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 MYRFQ9Y2G1 1151 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 DNAJC16Q9Y2G8 782 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 GIT1Q9Y2X7 761 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 NRCAMQ92823 1304 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 hCG_1818297A0A087WSY0 165 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 TLR3O15455 904 aaKnown RBP8.81□□□□□ -1
SHQ1-203ENST00000463369 FOXD2O60548 495 aaPredicted RBP8.81□□□□□ -1
SHQ1-203ENST00000463369 SPAG6O75602 509 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 SULT1C4O75897 302 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 TMEM63AO94886 807 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 C22orf31O95567 290 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 KRT1P04264 644 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 SMIM10L2AP0DMW4 78 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 SMIM10L2BP0DMW5 78 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 COX4I1P13073 169 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 ZNF26P17031 533 aaPredicted RBP8.81□□□□□ -1
SHQ1-203ENST00000463369 IDH3AP50213 366 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 RPS3AP61247 264 aaKnown RBP8.81□□□□□ -1
SHQ1-203ENST00000463369 MRPS22P82650 360 aaKnown RBP8.81□□□□□ -1
SHQ1-203ENST00000463369 PEX6Q13608 980 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 GRIK4Q16099 956 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 KCNA10Q16322 511 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 ZBED5Q49AG3 693 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 TFDP3Q5H9I0 405 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 LGSNQ5TDP6 509 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 KRT39Q6A163 491 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 PDPK2PQ6A1A2 396 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 PLEKHA7Q6IQ23 1121 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 EFCAB12Q6NXP0 572 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 ZCCHC23Q6ZST2 131 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 ZNF677Q86XU0 584 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 CLVS1Q8IUQ0 354 aaPredicted RBP8.81□□□□□ -1
SHQ1-203ENST00000463369 CBARPQ8N350 705 aaPredicted RBP8.81□□□□□ -1
SHQ1-203ENST00000463369 GSDMBQ8TAX9 411 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 STARD8Q92502 1023 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 TMEM143Q96AN5 459 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 EME1Q96AY2 570 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 C12orf43Q96C57 262 aaKnown RBP8.81□□□□□ -1
SHQ1-203ENST00000463369 RADILQ96JH8 1075 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 KCNK17Q96T54 332 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 PKP2Q99959 881 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 NACA2Q9H009 215 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.81□□□□□ -1
SHQ1-203ENST00000463369 POLR3FQ9H1D9 316 aaPredicted RBP8.81□□□□□ -1
SHQ1-203ENST00000463369 ST6GALNAC4Q9H4F1 302 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 PAK6Q9NQU5 681 aaPredicted RBP8.81□□□□□ -1
SHQ1-203ENST00000463369 OLAHQ9NV23 265 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 SCHIP1Q9P0W5 487 aaPredicted RBP8.81□□□□□ -1
SHQ1-203ENST00000463369 BCAP29Q9UHQ4 241 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 TEX264Q9Y6I9 313 aa8.81□□□□□ -1
SHQ1-203ENST00000463369 ANK1P16157 1881 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 CITO14578 2027 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 PRSS51A0A1B0GVH4 220 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 KBTBD13C9JR72 458 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 PSMD12O00232 456 aaPredicted RBP8.8□□□□□ -1
SHQ1-203ENST00000463369 CLASP2O75122 1294 aaKnown RBP8.8□□□□□ -1
SHQ1-203ENST00000463369 CNOT3O75175 753 aaKnown RBP8.8□□□□□ -1
SHQ1-203ENST00000463369 ESRRBO95718 433 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 C1QAP02745 245 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 ASGR1P07306 291 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 TCF4P15884 667 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 HOXC8P31273 242 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 CRHR1P34998 444 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 GDF10P55107 478 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 PEX3P56589 373 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 YWHAGP61981 247 aaKnown RBP eCLIP8.8□□□□□ -1
SHQ1-203ENST00000463369 ADAM17P78536 824 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 DMP1Q13316 513 aaPredicted RBP8.8□□□□□ -1
SHQ1-203ENST00000463369 INAQ16352 499 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 MARCH8Q5T0T0 291 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 TEDDM1Q5T9Z0 273 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 LRRC38Q5VT99 294 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 OGFOD2Q6N063 350 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 FBXO46Q6PJ61 603 aaPredicted RBP8.8□□□□□ -1
SHQ1-203ENST00000463369 GPR155Q7Z3F1 870 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 GPR141Q7Z602 305 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 CARM1Q86X55 608 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 ETFBKMTQ8IXQ9 262 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 CPA6Q8N4T0 437 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 LINC01465Q8N7H1 131 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 TMEM102Q8N9M5 508 aaPredicted RBP8.8□□□□□ -1
SHQ1-203ENST00000463369 TBC1D15Q8TC07 691 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 HM13Q8TCT9 377 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 BSNDQ8WZ55 320 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 NKD1Q969G9 470 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 VCPIP1Q96JH7 1222 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 SERPINI1Q99574 410 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 TSEN34Q9BSV6 310 aaKnown RBP8.8□□□□□ -1
SHQ1-203ENST00000463369 DCUN1D5Q9BTE7 237 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 HGH1Q9BTY7 390 aa8.8□□□□□ -1
SHQ1-203ENST00000463369 WDR12Q9GZL7 423 aaKnown RBP8.8□□□□□ -1
SHQ1-203ENST00000463369 UNC93B1Q9H1C4 597 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms