RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 DXOO77932 396 aaKnown RBP8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 F9P00740 461 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 PLEKP08567 350 aaPredicted RBP8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 KRT3P12035 628 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 CKMT1AP12532 417 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 GZMAP12544 262 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 MYF5P13349 255 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 TNFAIP3P21580 790 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 GPD1P21695 349 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 ACTN2P35609 894 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 NNMTP40261 264 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 CLDN2P57739 230 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 CXADRP78310 365 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 KLHL30Q0D2K2 578 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 FGL2Q14314 439 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 STAT4Q14765 748 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 ACCSLQ4AC99 568 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 TMEM259Q4ZIN3 620 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 ALFQ53S48 1182 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 MANEALQ5VSG8 457 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 SEL1L3Q68CR1 1132 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 PLEKHA7Q6IQ23 1121 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 DNAJC24Q6P3W2 148 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 STRADAQ7RTN6 431 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 GPR155Q7Z3F1 870 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 ABI3BPQ7Z7G0 1075 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 HORMAD1Q86X24 394 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 PLPP6Q8IY26 295 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 CCDC185Q8N715 623 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 CHST14Q8NCH0 376 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 FAM172AQ8WUF8 416 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 SYN2Q92777 582 aaPredicted RBP8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 KLHDC7BQ96G42 594 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 VCPIP1Q96JH7 1222 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 MCEEQ96PE7 176 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 HAPLN3Q96S86 360 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 SELENOOQ9BVL4 669 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 MAGEB5Q9BZ81 275 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 WDCPQ9H6R7 721 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 ASCL3Q9NQ33 180 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 KLHL11Q9NVR0 708 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 SLC12A6Q9UHW9 1150 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 VPS28Q9UK41 221 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 LRRK2Q5S007 2527 aa8.08□□□□□ -1.12
CDC42BPA-210ENST00000462553 A0A0D9SEW6 157 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 DRGXA6NNA5 263 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 FAM72CH0Y354 149 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 KPNA3O00505 521 aaPredicted RBP8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 SLC31A1O15431 190 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 SMAD6O43541 496 aaKnown RBP8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 BNIP3LO60238 219 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 OPA1O60313 960 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 CLDN11O75508 207 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 MPOP05164 745 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 HNRNPA2B1P22626 353 aaKnown RBP8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 SDC4P31431 198 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 HNRNPH3P31942 346 aaKnown RBP8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 CASP14P31944 242 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 CHRNA3P32297 505 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 ZNF143P52747 638 aaPredicted RBP8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 OXCT1P55809 520 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 PCBP4P57723 403 aaKnown RBP8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 DAB2P98082 770 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 E2F1Q01094 437 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 NRG1Q02297 640 aaPredicted RBP8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 MTA1Q13330 715 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 MAMLD1Q13495 774 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 TDRD12Q587J7 1177 aaKnown RBP8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 TPRG1LQ5T0D9 272 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 FAM72AQ5TYM5 149 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 FAM72DQ6L9T8 149 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 NEK5Q6P3R8 708 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 C22orf39Q6P5X5 142 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 TMC6Q7Z403 805 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 FAM72BQ86X60 149 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 VSTM4Q8IW00 320 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 FAM181AQ8N9Y4 354 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 TMIEQ8NEW7 156 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 NTAN1Q96AB6 310 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 VOPP1Q96AW1 172 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 IQCDQ96DY2 449 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 APOLD1Q96LR9 279 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 C1orf74Q96LT6 269 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 CALN1Q9BXU9 219 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 HDAC8Q9BY41 377 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 SEMA4CQ9C0C4 833 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 SIK2Q9H0K1 926 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 ISCUQ9H1K1 167 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 NLGN3Q9NZ94 848 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 WASF2Q9Y6W5 498 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 NBPF19A0A087WUL8 3843 aa8.07□□□□□ -1.12
CDC42BPA-210ENST00000462553 A0A087X0T9 212 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 PMS2P1A4D2B8 440 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 POM121BA6NF01 834 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 K7ESM1 405 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 ERVH48-1M5A8F1 160 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 CASC3O15234 703 aaKnown RBP8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 RAD51BO15315 384 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 SPINT1O43278 529 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms