RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 AADATQ8N5Z0 425 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 FRMD1Q8N878 549 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 ARRDC3Q96B67 414 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 NSMCE3Q96MG7 304 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 AGAP3Q96P47 875 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 OSBPL1AQ9BXW6 950 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 FRMD8P1Q9BZ68 369 aaPredicted RBP11.94□□□□□ -0.5
CPNE1-221ENST00000462352 SCUBE2Q9NQ36 999 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 HAUS2Q9NVX0 235 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 FBXL12Q9NXK8 326 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 SERGEFQ9UGK8 458 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 DNPEPQ9ULA0 475 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 TTC7AQ9ULT0 858 aaPredicted RBP11.94□□□□□ -0.5
CPNE1-221ENST00000462352 INVSQ9Y283 1065 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 TTLL3Q9Y4R7 772 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 PCDHGA2Q9Y5H1 932 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 CACNA1HO95180 2353 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 IGHV1OR15-9A0A0B4J2B8 117 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 A0A1W2PP55 124 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 PGRMC1O00264 195 aaKnown RBP11.93□□□□□ -0.5
CPNE1-221ENST00000462352 PLK4O00444 970 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 KCNN4O15554 427 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 LIASO43766 372 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 LILRB5O75023 590 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 RNASEH2AO75792 299 aaKnown RBP11.93□□□□□ -0.5
CPNE1-221ENST00000462352 IGLV3-19P01714 112 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 CASQ1P31415 396 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 CNR2P34972 360 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 PTPN5P54829 565 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 DSC2Q02487 901 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 NIPAL4Q0D2K0 466 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 SFSWAPQ12872 951 aaKnown RBP11.93□□□□□ -0.5
CPNE1-221ENST00000462352 SRSF5Q13243 272 aaKnown RBP11.93□□□□□ -0.5
CPNE1-221ENST00000462352 BYSLQ13895 437 aaKnown RBP11.93□□□□□ -0.5
CPNE1-221ENST00000462352 GRM3Q14832 879 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 CCNG2Q16589 344 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 ZNF805Q5CZA5 627 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 SYT10Q6XYQ8 523 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 FAM124AQ86V42 546 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 KBTBD6Q86V97 674 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 CAMK1DQ8IU85 385 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 ZNF567Q8N184 647 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 HDDC3Q8N4P3 179 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.93□□□□□ -0.5
CPNE1-221ENST00000462352 FAM160A2Q8N612 972 aaPredicted RBP11.93□□□□□ -0.5
CPNE1-221ENST00000462352 ARRDC2Q8TBH0 407 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 ACTRT1Q8TDG2 376 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 GANCQ8TET4 914 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 GAB3Q8WWW8 586 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 PPP1R16AQ96I34 528 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 SPACA7Q96KW9 195 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 TEKT5Q96M29 485 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 C16orf45Q96MC5 204 aaPredicted RBP11.93□□□□□ -0.5
CPNE1-221ENST00000462352 KLHL32Q96NJ5 620 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 TUBGCP5Q96RT8 1024 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 VAT1Q99536 393 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 OMDQ99983 421 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 SEMA3CQ99985 751 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 FERMT1Q9BQL6 677 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 ATP13A3Q9H7F0 1226 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 USP29Q9HBJ7 922 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 NOD2Q9HC29 1040 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 DYRK4Q9NR20 520 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 SMARCAL1Q9NZC9 954 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 NCKAP1Q9Y2A7 1128 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 HCN4Q9Y3Q4 1203 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 SAR1BQ9Y6B6 198 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 R4GN57 208 aa11.93□□□□□ -0.5
CPNE1-221ENST00000462352 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-221ENST00000462352 C16orf96A6NNT2 1141 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 HRO43593 1189 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 RPP40O75818 363 aaKnown RBP11.92□□□□□ -0.5
CPNE1-221ENST00000462352 ZNF189O75820 626 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-221ENST00000462352 CES1P23141 567 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 ITGB7P26010 798 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 SERPINA4P29622 427 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 OXTRP30559 389 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 CD68P34810 354 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-221ENST00000462352 BCL2L1Q07817 233 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 CNTN1Q12860 1018 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 IHHQ14623 411 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 OASLQ15646 514 aaKnown RBP11.92□□□□□ -0.5
CPNE1-221ENST00000462352 PIP5KL1Q5T9C9 394 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-221ENST00000462352 ERN2Q76MJ5 926 aaKnown RBP11.92□□□□□ -0.5
CPNE1-221ENST00000462352 PARS2Q7L3T8 475 aaKnown RBP11.92□□□□□ -0.5
CPNE1-221ENST00000462352 PID1Q7Z2X4 250 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 PRELID2Q8N945 189 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 NKD2Q969F2 451 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-221ENST00000462352 FAM131CQ96AQ9 280 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 ZNF641Q96N77 438 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-221ENST00000462352 NAP1L3Q99457 506 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-221ENST00000462352 TMEM121Q9BTD3 319 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 HDAC8Q9BY41 377 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 NEUROG2Q9H2A3 272 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 SUV39H2Q9H5I1 410 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 GLOD4Q9HC38 313 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 WSB2Q9NYS7 404 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-221ENST00000462352 KLHL8Q9P2G9 620 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-221ENST00000462352 MBD1Q9UIS9 605 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms