RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 LRRC73Q5JTD7 316 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 GCNT7Q6ZNI0 430 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 ZSCAN30Q86W11 494 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 SPATS2Q86XZ4 545 aaKnown RBP10.32□□□□□ -0.76
SF3A3-204ENST00000462258 PSTKQ8IV42 348 aaKnown RBP10.32□□□□□ -0.76
SF3A3-204ENST00000462258 CHCHD4Q8N4Q1 142 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 NPWQ8N729 165 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 PNPLA1Q8N8W4 532 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 NETO2Q8NC67 525 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 SAP25Q8TEE9 199 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 ADAMTS14Q8WXS8 1223 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 RAB7BQ96AH8 199 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 VOPP1Q96AW1 172 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 ARHGEF26Q96DR7 871 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 KLHDC7BQ96G42 594 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 KLHL32Q96NJ5 620 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 TMEM121BQ9BXQ6 578 aaPredicted RBP10.32□□□□□ -0.76
SF3A3-204ENST00000462258 ERVMER34-1Q9H9K5 563 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 TOR4AQ9NXH8 423 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 LHX3Q9UBR4 397 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 GGT7Q9UJ14 662 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 ANAPC7Q9UJX3 599 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 SHROOM3Q8TF72 1996 aa10.32□□□□□ -0.76
SF3A3-204ENST00000462258 A0A087X0T9 212 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 ARHGAP42A6NI28 874 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 GOLGA8CPA6NN73 597 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 A6NNZ2 444 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 H3BRJ5 948 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 J3KR12 359 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 DFFAO00273 331 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 NEMP1O14524 444 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 SPINT1O43278 529 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 CBFA2T2O43439 604 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 TNFSF14O43557 240 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 PRAMEF11O60813 436 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 POP4O95707 220 aaKnown RBP10.31□□□□□ -0.76
SF3A3-204ENST00000462258 ATXN1LP0C7T5 689 aaKnown RBP10.31□□□□□ -0.76
SF3A3-204ENST00000462258 FAM228BP0C875 321 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 TCF4P15884 667 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 ERCC2P18074 760 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 IL1R2P27930 398 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 RXRGP48443 463 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 PAPOLAP51003 745 aaKnown RBP10.31□□□□□ -0.76
SF3A3-204ENST00000462258 ZNF135P52742 658 aaPredicted RBP10.31□□□□□ -0.76
SF3A3-204ENST00000462258 DPYSQ14117 519 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 ACAP1Q15027 740 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 NFKBIBQ15653 356 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 DPYSL2Q16555 572 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 MYLK3Q32MK0 819 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 GDPD4Q6W3E5 623 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 KYAT3Q6YP21 454 aaKnown RBP10.31□□□□□ -0.76
SF3A3-204ENST00000462258 PTAR1Q7Z6K3 402 aaPredicted RBP10.31□□□□□ -0.76
SF3A3-204ENST00000462258 SLCO6A1Q86UG4 719 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 ARHGAP12Q8IWW6 846 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 NIPA2Q8N8Q9 360 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 OR13H1Q8NG92 308 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 HSPH1Q92598 858 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 GATA6Q92908 595 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 NUP85Q9BW27 656 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 CALN1Q9BXU9 219 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 SLC39A8Q9C0K1 460 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 TSPY26PQ9H489 355 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 ZWILCHQ9H900 591 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 SP110Q9HB58 689 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.31□□□□□ -0.76
SF3A3-204ENST00000462258 MSRB2Q9Y3D2 182 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.31□□□□□ -0.762e-9■■■□□ 14.8
SF3A3-204ENST00000462258 PLXNB3Q9ULL4 1909 aa10.31□□□□□ -0.76
SF3A3-204ENST00000462258 RAD51BO15315 384 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 INSIG1O15503 277 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 TSPAN6O43657 245 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 SDC3O75056 442 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 DKK1O94907 266 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 PIGNO95427 931 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 CYP1A2P05177 515 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 PROS1P07225 676 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 ARL4AP40617 200 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 CLDN2P57739 230 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 SLC25A11Q02978 314 aaKnown RBP10.3□□□□□ -0.76
SF3A3-204ENST00000462258 TRIM14Q14142 442 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 FGL2Q14314 439 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 PIGHQ14442 188 aaPredicted RBP10.3□□□□□ -0.76
SF3A3-204ENST00000462258 CYTH1Q15438 398 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 CCDC122Q5T0U0 273 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 CFAP58Q5T655 872 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 AFMIDQ63HM1 303 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 SPECC1LQ69YQ0 1117 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 ALKBH5Q6P6C2 394 aaKnown RBP10.3□□□□□ -0.76
SF3A3-204ENST00000462258 ABI3BPQ7Z7G0 1075 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 SLC22A18ASQ8N1D0 253 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 EID2Q8N6I1 236 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 DENND6BQ8NEG7 585 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 FEM1CQ96JP0 617 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 BTBD6Q96KE9 485 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 CNDP2Q96KP4 475 aaKnown RBP10.3□□□□□ -0.76
SF3A3-204ENST00000462258 CINPQ9BW66 212 aaPredicted RBP10.3□□□□□ -0.76
SF3A3-204ENST00000462258 SLC17A9Q9BYT1 436 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 CWC15Q9P013 229 aaKnown RBP10.3□□□□□ -0.76
SF3A3-204ENST00000462258 IP6K2Q9UHH9 426 aa10.3□□□□□ -0.76
SF3A3-204ENST00000462258 NENFQ9UMX5 172 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms