RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 XPR1Q9UBH6 696 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 SUCOQ9UBS9 1254 aaKnown RBP8.94□□□□□ -0.98
HDAC3-202ENST00000459727 TMCO1Q9UM00 188 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 DTNAQ9Y4J8 743 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 NR2E3Q9Y5X4 410 aa8.94□□□□□ -0.98
HDAC3-202ENST00000459727 A0A0U1RQF3 1178 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 E9PAM4 449 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 TK2O00142 265 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 TRIM38O00635 465 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 PFDN6O15212 129 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 GRID2O43424 1007 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 ZBTB14O43829 449 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 DLX3O60479 287 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 VPS4BO75351 444 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 PAGE1O75459 146 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 BCAS2O75934 225 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-202ENST00000459727 VAPBO95292 243 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 EPOP01588 193 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 IGHA2P01877 340 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 AHSGP02765 367 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 HSPA8P11142 646 aaKnown RBP8.93□□□□□ -0.98
HDAC3-202ENST00000459727 RAG1P15918 1043 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 HLA-DPA1P20036 260 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 BDNFP23560 247 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 MPSTP25325 297 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 SLC1A2P43004 574 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 LEPRP48357 1165 aaKnown RBP8.93□□□□□ -0.98
HDAC3-202ENST00000459727 ARCN1P48444 511 aaKnown RBP8.93□□□□□ -0.98
HDAC3-202ENST00000459727 ACADVLP49748 655 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 SERPINH1P50454 418 aaKnown RBP8.93□□□□□ -0.98
HDAC3-202ENST00000459727 SLC5A3P53794 718 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 INHBCP55103 352 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 YBEYP58557 167 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-202ENST00000459727 STX1BP61266 288 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 NFKB2Q00653 900 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 IRF9Q00978 393 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 PFKPQ01813 784 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 YWHAHQ04917 246 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-202ENST00000459727 NSUN2Q08J23 767 aaKnown RBP eCLIP8.93□□□□□ -0.98
HDAC3-202ENST00000459727 MGAT3Q09327 533 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 SMARCB1Q12824 385 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 TRAP1Q12931 704 aaKnown RBP8.93□□□□□ -0.98
HDAC3-202ENST00000459727 GRM2Q14416 872 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 TRIP10Q15642 601 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 LSM12Q3MHD2 195 aaKnown RBP8.93□□□□□ -0.98
HDAC3-202ENST00000459727 PARP15Q460N3 678 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 SLC9B1Q4ZJI4 515 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 PIGGQ5H8A4 983 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 MARC1Q5VT66 337 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 ZNF470Q6ECI4 717 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 FAM45BPQ6NSW5 357 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 NAPRTQ6XQN6 538 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 AGMOQ6ZNB7 445 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 SNX32Q86XE0 403 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 DSELQ8IZU8 1212 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 CENPLQ8N0S6 344 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-202ENST00000459727 PHTF2Q8N3S3 785 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 GALNT15Q8N3T1 639 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 GOLM1Q8NBJ4 401 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 FAM45AQ8TCE6 357 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 KCTD4Q8WVF5 259 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 CCDC124Q96CT7 223 aaKnown RBP8.93□□□□□ -0.98
HDAC3-202ENST00000459727 IMP4Q96G21 291 aaKnown RBP8.93□□□□□ -0.98
HDAC3-202ENST00000459727 CLPTM1LQ96KA5 538 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 C8orf48Q96LL4 319 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 LENG8Q96PV6 779 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-202ENST00000459727 CDK5RAP1Q96SZ6 601 aaKnown RBP8.93□□□□□ -0.98
HDAC3-202ENST00000459727 SLC25A23Q9BV35 468 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 ZYG11BQ9C0D3 744 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 MFSD1Q9H3U5 465 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 CAB39LQ9H9S4 337 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 WDR41Q9HAD4 459 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 CYP4F11Q9HBI6 524 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 ANLNQ9NQW6 1124 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 CPSF2Q9P2I0 782 aaKnown RBP8.93□□□□□ -0.98
HDAC3-202ENST00000459727 THEGQ9P2T0 379 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 NEU3Q9UQ49 428 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 SCML2Q9UQR0 700 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 VPS9D1Q9Y2B5 631 aa8.93□□□□□ -0.98
HDAC3-202ENST00000459727 FNDC1Q4ZHG4 1894 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-202ENST00000459727 LOC100653049A0A140TA62 436 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 CASTOR2A6NHX0 329 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 KCNU1A8MYU2 1149 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-202ENST00000459727 I6L893 689 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-202ENST00000459727 AIM2O14862 343 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 PHGDHO43175 533 aaKnown RBP8.92□□□□□ -0.98
HDAC3-202ENST00000459727 DENRO43583 198 aaKnown RBP8.92□□□□□ -0.98
HDAC3-202ENST00000459727 KRT34O76011 436 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 PDE5AO76074 875 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 IPO13O94829 963 aaKnown RBP8.92□□□□□ -0.98
HDAC3-202ENST00000459727 RTN3O95197 1032 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-202ENST00000459727 FGF1P05230 155 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 VCLP18206 1134 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 OGNP20774 298 aaKnown RBP8.92□□□□□ -0.98
HDAC3-202ENST00000459727 ARRB2P32121 409 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 GRIK1P39086 918 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 MAGEA11P43364 429 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 MAPKAPK2P49137 400 aa8.92□□□□□ -0.98
HDAC3-202ENST00000459727 TUBP50607 506 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms