RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 SCN8AQ9UQD0 1980 aa8.86□□□□□ -0.99
RIF1-208ENST00000457745 GOLGA6BA6NDN3 693 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 SOBPA7XYQ1 873 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 PRRT4C9JH25 899 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 ARNTLO00327 626 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 MTSS1O43312 755 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 PDHA1P08559 390 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 PIRTP0C851 137 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 SRCP12931 536 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 POU3F3P20264 500 aaPredicted RBP8.85□□□□□ -0.99
RIF1-208ENST00000457745 ARNTP27540 789 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 NMBRP28336 390 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 OPRD1P41143 372 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 SOX9P48436 509 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 PLK1P53350 603 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 GALNT3Q14435 633 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 SLMAPQ14BN4 828 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 CCDC85BQ15834 202 aaPredicted RBP8.85□□□□□ -0.99
RIF1-208ENST00000457745 ANO4Q32M45 955 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 MARC1Q5VT66 337 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 TTC39BQ5VTQ0 682 aaPredicted RBP8.85□□□□□ -0.99
RIF1-208ENST00000457745 STEAP4Q687X5 459 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 ITPRIPL1Q6GPH6 555 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 TIGD7Q6NT04 549 aaPredicted RBP8.85□□□□□ -0.99
RIF1-208ENST00000457745 RANBP10Q6VN20 620 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 CENPUQ71F23 418 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 TRMT10CQ7L0Y3 403 aaKnown RBP8.85□□□□□ -0.99
RIF1-208ENST00000457745 PCGF5Q86SE9 256 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 ZNF366Q8N895 744 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.85□□□□□ -0.99
RIF1-208ENST00000457745 DCAF4L2Q8NA75 395 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 BPIFB1Q8TDL5 484 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 FBF1Q8TES7 1133 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 CYB5D2Q8WUJ1 264 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 OSCP1Q8WVF1 389 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 SUSD6Q92537 303 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 EZH1Q92800 747 aaPredicted RBP8.85□□□□□ -0.99
RIF1-208ENST00000457745 ERLEC1Q96DZ1 483 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 MRRFQ96E11 262 aaKnown RBP8.85□□□□□ -0.99
RIF1-208ENST00000457745 GUCD1Q96NT3 240 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 VAT1Q99536 393 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 EBNA1BP2Q99848 306 aaKnown RBP8.85□□□□□ -0.99
RIF1-208ENST00000457745 DDX50Q9BQ39 737 aaKnown RBP8.85□□□□□ -0.99
RIF1-208ENST00000457745 TBL1YQ9BQ87 522 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 TM6SF2Q9BZW4 377 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 TRPV4Q9HBA0 871 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 FBRSL1Q9HCM7 1045 aaKnown RBP8.85□□□□□ -0.99
RIF1-208ENST00000457745 DUS2Q9NX74 493 aaKnown RBP8.85□□□□□ -0.99
RIF1-208ENST00000457745 GTSE1Q9NYZ3 720 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 GGA2Q9UJY4 613 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 FBXO10Q9UK96 956 aa8.85□□□□□ -0.99
RIF1-208ENST00000457745 USP15Q9Y4E8 981 aaPredicted RBP8.85□□□□□ -0.99
RIF1-208ENST00000457745 ZCWPW2A0A1B0GU75 182 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 TCRBV9S1A1TA0A576 114 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 E7EVH7 732 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 AURKAO14965 403 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 EIF3HO15372 352 aaKnown RBP eCLIP8.84□□□□□ -0.99
RIF1-208ENST00000457745 HOXC11O43248 304 aaPredicted RBP8.84□□□□□ -0.99
RIF1-208ENST00000457745 ATP8B1O43520 1251 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 BUD23O43709 281 aaKnown RBP8.84□□□□□ -0.99
RIF1-208ENST00000457745 ATP9BO43861 1147 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 TULP3O75386 442 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 STK10O94804 968 aaKnown RBP8.84□□□□□ -0.99
RIF1-208ENST00000457745 PIGNO95427 931 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 PABPC1P11940 636 aaKnown RBP8.84□□□□□ -0.99
RIF1-208ENST00000457745 LAMP2P13473 410 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 CA5AP35218 305 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 ABCG1P45844 678 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 SERPINH1P50454 418 aaKnown RBP8.84□□□□□ -0.99
RIF1-208ENST00000457745 METAP1P53582 386 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 PGGT1BP53609 377 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 SEMG2Q02383 582 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 KDSRQ06136 332 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 ITKQ08881 620 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 MTA1Q13330 715 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 ZNF235Q14590 738 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 PTPRNQ16849 979 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 TNFAIP8L3Q5GJ75 292 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 SIRPB2Q5JXA9 342 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 MPP7Q5T2T1 576 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 ACBD5Q5T8D3 534 aaPredicted RBP8.84□□□□□ -0.99
RIF1-208ENST00000457745 KCTD16Q68DU8 428 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 NCEH1Q6PIU2 408 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 LRIG3Q6UXM1 1119 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 LRRC49Q8IUZ0 686 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 CHST14Q8NCH0 376 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 SMRP1Q8NCR6 262 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 MZB1Q8WU39 189 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 MFSD3Q96ES6 412 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 STAMBPL1Q96FJ0 436 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 ZNF599Q96NL3 588 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 PSKH2Q96QS6 385 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 XPO6Q96QU8 1125 aaKnown RBP8.84□□□□□ -0.99
RIF1-208ENST00000457745 DHRS4Q9BTZ2 278 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 CINPQ9BW66 212 aaPredicted RBP8.84□□□□□ -0.99
RIF1-208ENST00000457745 FOXP3Q9BZS1 431 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 VPS37BQ9H9H4 285 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 KIF9Q9HAQ2 790 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 PRDM6Q9NQX0 595 aa8.84□□□□□ -0.99
RIF1-208ENST00000457745 CHRAC1Q9NRG0 131 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms