RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 PRKCGP05129 697 aa15.49■□□□□ 0.07
CROCCP4-201ENST00000457096 ZNF143P52747 638 aaPredicted RBP15.49■□□□□ 0.07
CROCCP4-201ENST00000457096 PDE1CQ14123 709 aaPredicted RBP15.49■□□□□ 0.07
CROCCP4-201ENST00000457096 SOWAHCQ53LP3 525 aaPredicted RBP15.49■□□□□ 0.07
CROCCP4-201ENST00000457096 PPP1R15BQ5SWA1 713 aa15.49■□□□□ 0.07
CROCCP4-201ENST00000457096 E4F1Q66K89 784 aaPredicted RBP15.49■□□□□ 0.07
CROCCP4-201ENST00000457096 GDPD4Q6W3E5 623 aa15.49■□□□□ 0.07
CROCCP4-201ENST00000457096 KYAT3Q6YP21 454 aaKnown RBP15.49■□□□□ 0.07
CROCCP4-201ENST00000457096 VPS36Q86VN1 386 aa15.49■□□□□ 0.07
CROCCP4-201ENST00000457096 MCOLN2Q8IZK6 566 aa15.49■□□□□ 0.07
CROCCP4-201ENST00000457096 RTL3Q8N8U3 475 aaKnown RBP15.49■□□□□ 0.07
CROCCP4-201ENST00000457096 CELF6Q96J87 481 aaKnown RBP15.49■□□□□ 0.07
CROCCP4-201ENST00000457096 WRAP53Q9BUR4 548 aaKnown RBP15.49■□□□□ 0.07
CROCCP4-201ENST00000457096 C1QTNF2Q9BXJ5 285 aa15.49■□□□□ 0.07
CROCCP4-201ENST00000457096 TRIM7Q9C029 511 aa15.49■□□□□ 0.07
CROCCP4-201ENST00000457096 MBNL1Q9NR56 388 aaKnown RBP15.49■□□□□ 0.07
CROCCP4-201ENST00000457096 LHX3Q9UBR4 397 aa15.49■□□□□ 0.07
CROCCP4-201ENST00000457096 HPCAL4Q9UM19 191 aa15.49■□□□□ 0.07
CROCCP4-201ENST00000457096 COQ6Q9Y2Z9 468 aa15.49■□□□□ 0.07
CROCCP4-201ENST00000457096 HS3ST3A1Q9Y663 406 aa15.49■□□□□ 0.07
CROCCP4-201ENST00000457096 J3KR12 359 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 K7ESM1 405 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 SCAMP1O15126 338 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 AP1G1O43747 822 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 POP4O95707 220 aaKnown RBP15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 IGFALSP35858 605 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 ETFBP38117 255 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 SNRPD1P62314 119 aaKnown RBP15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 TYRO3Q06418 890 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 C1QBPQ07021 282 aaKnown RBP15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 EIF2B5Q13144 721 aaKnown RBP15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 SGCGQ13326 291 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 C1orf61Q13536 156 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 CYTH1Q15438 398 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 DEFB133Q30KQ1 61 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 EFHC2Q5JST6 749 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 ACAD10Q6JQN1 1059 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 CRTC1Q6UUV9 634 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 IRF2BP2Q7Z5L9 587 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 ARFGAP1Q8N6T3 406 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 ZNF548Q8NEK5 533 aaPredicted RBP15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 ANKRD20A12PQ8NF67 263 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 NXPE2Q96DL1 559 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 GBP4Q96PP9 640 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 PEBP4Q96S96 227 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 SYT11Q9BT88 431 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 TMEM51Q9NW97 253 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 TMEM63CQ9P1W3 806 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 IPO11Q9UI26 975 aaKnown RBP15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 CLCA2Q9UQC9 943 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 MYLKQ15746 1914 aa15.48■□□□□ 0.07
CROCCP4-201ENST00000457096 CHD5Q8TDI0 1954 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 SPTY2D1-AS1A0A0U1RR47 76 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 LRRC10BA6NIK2 292 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 AREL1O15033 823 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 BRINP1O60477 761 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 MT-CO3P00414 261 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 CSF2P04141 144 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 CELA2BP08218 269 aaPredicted RBP15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 TIMP2P16035 220 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 EIF2S3P41091 472 aaKnown RBP15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 RHOAP61586 193 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 SERINC3Q13530 473 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 CDKN3Q16667 212 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 ANO6Q4KMQ2 910 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 DCUN1D2Q6PH85 259 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 TTC7BQ86TV6 843 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 PLPP6Q8IY26 295 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 LMX1AQ8TE12 382 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 GDAP1L1Q96MZ0 367 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 CNPY3Q9BT09 278 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 TRPM6Q9BX84 2022 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 TTYH3Q9C0H2 523 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 PCSK1NQ9UHG2 260 aa15.47■□□□□ 0.07
CROCCP4-201ENST00000457096 BPTFQ12830 3046 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 A0A087WV48 116 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 LRRC53A6NM62 1247 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 FPGTO14772 594 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 TSPAN6O43657 245 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 OPA1O60313 960 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 GCATO75600 419 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 CKMT1AP12532 417 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 NME1P15531 152 aaKnown RBP15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 FERP16591 822 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 JUNDP17535 347 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 TNFAIP3P21580 790 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 RGRP47804 291 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 GEMIN4P57678 1058 aaKnown RBP15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 PFN3P60673 137 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 HNRNPKP61978 463 aaKnown RBP eCLIP15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 ILKQ13418 452 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 KLHL40Q2TBA0 621 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 CCDC183Q5T5S1 534 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 GUSBP11Q6P575 273 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 ARHGAP36Q6ZRI8 547 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 PARGQ86W56 976 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 ZSWIM9Q86XI8 627 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 TP53INP2Q8IXH6 220 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 DCBLD1Q8N8Z6 715 aa15.46■□□□□ 0.07
CROCCP4-201ENST00000457096 RFFLQ8WZ73 363 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms