RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 ZMYM5Q9UJ78 669 aa12.46□□□□□ -0.42
NEDD4L-208ENST00000456173 LEF1Q9UJU2 399 aaPredicted RBP12.46□□□□□ -0.42
NEDD4L-208ENST00000456173 SSR3Q9UNL2 185 aa12.46□□□□□ -0.42
NEDD4L-208ENST00000456173 VPS26AO75436 327 aa12.46□□□□□ -0.42
NEDD4L-208ENST00000456173 KDM4BO94953 1096 aa12.46□□□□□ -0.42
NEDD4L-208ENST00000456173 PRKACAP17612 351 aa12.46□□□□□ -0.42
NEDD4L-208ENST00000456173 CDC42P60953 191 aa12.46□□□□□ -0.42
NEDD4L-208ENST00000456173 PRKCEQ02156 737 aa12.46□□□□□ -0.42
NEDD4L-208ENST00000456173 RELAQ04206 551 aa12.46□□□□□ -0.42
NEDD4L-208ENST00000456173 PDIA6Q15084 440 aa12.46□□□□□ -0.42
NEDD4L-208ENST00000456173 AMHR2Q16671 573 aa12.46□□□□□ -0.42
NEDD4L-208ENST00000456173 IL23RQ5VWK5 629 aa12.46□□□□□ -0.42
NEDD4L-208ENST00000456173 LIPMQ5VYY2 423 aa12.46□□□□□ -0.42
NEDD4L-208ENST00000456173 C16orf86Q6ZW13 317 aa12.46□□□□□ -0.42
NEDD4L-208ENST00000456173 CERS2Q96G23 380 aa12.46□□□□□ -0.42
NEDD4L-208ENST00000456173 SERAC1Q96JX3 654 aa12.46□□□□□ -0.42
NEDD4L-208ENST00000456173 ZNF560Q96MR9 790 aa12.46□□□□□ -0.42
NEDD4L-208ENST00000456173 TDRD3Q9H7E2 651 aaKnown RBP12.46□□□□□ -0.42
NEDD4L-208ENST00000456173 GIT1Q9Y2X7 761 aa12.46□□□□□ -0.42
NEDD4L-208ENST00000456173 CLPXO76031 633 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 ZNF24P17028 368 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 MTHFRP42898 656 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 IDH3AP50213 366 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 OXCT1P55809 520 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 RFX4Q33E94 735 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 CCDC157Q569K6 752 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 PRR23BQ6ZRT6 265 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 OR52K1Q8NGK4 314 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 ISOC1Q96CN7 298 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 RIT2Q99578 217 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 EBNA1BP2Q99848 306 aaKnown RBP12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 NEK6Q9HC98 313 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 COQ3Q9NZJ6 369 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 PSME2Q9UL46 239 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 SAMHD1Q9Y3Z3 626 aaKnown RBP12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 JCADQ9P266 1359 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 IFNA16P05015 189 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 HMBSP08397 361 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 CDH1P12830 882 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 GNAZP19086 355 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 CRHR1P34998 444 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 CDH17Q12864 832 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 MERTKQ12866 999 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 TRIM28Q13263 835 aaKnown RBP12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 CTC1Q2NKJ3 1217 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 ZNF613Q6PF04 617 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 ZNF621Q6ZSS3 439 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 ACOT1Q86TX2 421 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 TREML1Q86YW5 311 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 CLIP4Q8N3C7 705 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 DNAJC28Q9NX36 388 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 ADPRHL2Q9NX46 363 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 XPR1Q9UBH6 696 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 NUP50Q9UKX7 468 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 MAPRE3Q9UPY8 281 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 CLTCQ00610 1675 aaKnown RBP12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 FUOMA2VDF0 154 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 FAM172BPA6NC97 362 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 C9JVG2 144 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 BCKDKO14874 412 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 XRCC1P18887 633 aaPredicted RBP12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 CCNG1P51959 295 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 DEFA5Q01523 94 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 STX4Q12846 297 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 NAB1Q13506 487 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 IL18Q14116 193 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 VPS72Q15906 364 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 PFKFB4Q16877 469 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 DCAF15Q66K64 600 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 TWF2Q6IBS0 349 aaKnown RBP12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 APTXQ7Z2E3 356 aaKnown RBP12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 ZNF410Q86VK4 478 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 NIM1KQ8IY84 436 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 GLT1D1Q96MS3 346 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 PKP2Q99959 881 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 MXRA8Q9BRK3 442 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 SACM1LQ9NTJ5 587 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 ABCG2Q9UNQ0 655 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 AXIN2Q9Y2T1 843 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 PEX16Q9Y5Y5 336 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 STON1Q9Y6Q2 735 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 E9PCH4 1651 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 TEX28O15482 410 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 THOP1P52888 689 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 RPL7AP62424 266 aaKnown RBP12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 ARF5P84085 180 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 PRKCQQ04759 706 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 RC3H1Q5TC82 1133 aaKnown RBP12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 TTC23LQ6PF05 361 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 TMPRSS11AQ6ZMR5 421 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 UBR7Q8N806 425 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 VPS35Q96QK1 796 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 PLA2G12BQ9BX93 195 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 MAGEE1Q9HCI5 957 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 DNAJC11Q9NVH1 559 aa12.45□□□□□ -0.42
NEDD4L-208ENST00000456173 TK2O00142 265 aa12.44□□□□□ -0.42
NEDD4L-208ENST00000456173 TCEA1P23193 301 aaKnown RBP12.44□□□□□ -0.42
NEDD4L-208ENST00000456173 ATP5F1P24539 256 aaPredicted RBP12.44□□□□□ -0.42
NEDD4L-208ENST00000456173 MZF1P28698 734 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms