RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 DRGXA6NNA5 263 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 HDAC3O15379 428 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 NCF2P19878 526 aaPredicted RBP15.23■□□□□ 0.03
LDLR-202ENST00000455727 KPNA2P52292 529 aaKnown RBP15.23■□□□□ 0.03
LDLR-202ENST00000455727 EFEMP1Q12805 493 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 MSLNQ13421 630 aaPredicted RBP15.23■□□□□ 0.03
LDLR-202ENST00000455727 NAA25Q14CX7 972 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 SNX30Q5VWJ9 437 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 ZNF470Q6ECI4 717 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 GALNT7Q86SF2 657 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 MYLK4Q86YV6 388 aaPredicted RBP15.23■□□□□ 0.03
LDLR-202ENST00000455727 TADA1Q96BN2 335 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 PANX3Q96QZ0 392 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 ELAC1Q9H777 363 aaKnown RBP15.23■□□□□ 0.03
LDLR-202ENST00000455727 TCF7L2Q9NQB0 619 aa15.23■□□□□ 0.03
LDLR-202ENST00000455727 IGLV3-27P01718 113 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 HAPLN1P10915 354 aaPredicted RBP15.22■□□□□ 0.03
LDLR-202ENST00000455727 ACADSP16219 412 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 CHRNA4P43681 627 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 SP3Q02447 781 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 MTA1Q13330 715 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 SLC9B1Q4ZJI4 515 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 ALFQ53S48 1182 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 ARL13AQ5H913 290 aaPredicted RBP15.22■□□□□ 0.03
LDLR-202ENST00000455727 TSTD2Q5T7W7 516 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 ZNF280DQ6N043 979 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 RIPOR1Q6ZS17 1223 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 MAPK15Q8TD08 544 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 DNAJC9Q8WXX5 260 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 FBXO32Q969P5 355 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 MRPL57Q9BQC6 102 aaKnown RBP15.22■□□□□ 0.03
LDLR-202ENST00000455727 MRPL46Q9H2W6 279 aaKnown RBP15.22■□□□□ 0.03
LDLR-202ENST00000455727 ATXN3LQ9H3M9 355 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 NT5MQ9NPB1 228 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 TLR8Q9NR97 1041 aaKnown RBP15.22■□□□□ 0.03
LDLR-202ENST00000455727 J3KR12 359 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 SLC22A2O15244 555 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 NVLO15381 856 aaKnown RBP15.22■□□□□ 0.03
LDLR-202ENST00000455727 CCNT2O60583 730 aaKnown RBP15.22■□□□□ 0.03
LDLR-202ENST00000455727 CNTN5O94779 1100 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 MMP2P08253 660 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 TFEBP19484 476 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 AVPR1AP37288 418 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 LEPRP48357 1165 aaKnown RBP15.22■□□□□ 0.03
LDLR-202ENST00000455727 TAS2R39P59534 338 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 BTKQ06187 659 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 RING1Q06587 406 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 SLC10A7Q0GE19 358 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 SMARCB1Q12824 385 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 PSMD5Q16401 504 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 SEL1L3Q68CR1 1132 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 PGM2L1Q6PCE3 622 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 LRRC74BQ6ZQY2 392 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 TFAP2DQ7Z6R9 452 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 ATAD1Q8NBU5 361 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 ACTRT2Q8TDY3 377 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 NXNL1Q96CM4 212 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 ZNF333Q96JL9 665 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 CLPTM1LQ96KA5 538 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 CNDP1Q96KN2 507 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 SPATA17Q96L03 361 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 SP110Q9HB58 689 aa15.22■□□□□ 0.03
LDLR-202ENST00000455727 CEP350Q5VT06 3117 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 LIN7AO14910 233 aaPredicted RBP15.21■□□□□ 0.03
LDLR-202ENST00000455727 DCXO43602 365 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 DLX3O60479 287 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 PIGNO95427 931 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 CHRNGP07510 517 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 FGFR3P22607 806 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 SERPINB5P36952 375 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 GLRBP48167 497 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 NAGLUP54802 743 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 SLC12A2P55011 1212 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 DNAJB13P59910 316 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 SLC25A3Q00325 362 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 IL10RBQ08334 325 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 KLF10Q13118 480 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 SEPT6Q14141 434 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 PCSK7Q16549 785 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 PARP15Q460N3 678 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 FAM171A1Q5VUB5 890 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 FBXL22Q6P050 247 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 TMC7Q7Z402 723 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 POU5F2Q8N7G0 328 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 SPPL2BQ8TCT7 592 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 NRG4Q8WWG1 115 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 ELMO2Q96JJ3 720 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 MARCH2Q9P0N8 246 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 XPR1Q9UBH6 696 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 ANGPTL2Q9UKU9 493 aa15.21■□□□□ 0.03
LDLR-202ENST00000455727 MROH6A6NGR9 719 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 SLC7A4O43246 635 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 ZBTB14O43829 449 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 NPHS1O60500 1241 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 FKBP6O75344 327 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 CPB1P15086 417 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 MPSTP25325 297 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 ADSLP30566 484 aaPredicted RBP15.21■□□□□ 0.02
LDLR-202ENST00000455727 CD86P42081 329 aa15.21■□□□□ 0.02
LDLR-202ENST00000455727 CLCN5P51795 746 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms