RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 TRIM13O60858 407 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 USP1O94782 785 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 HSPA4LO95757 839 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 PRKCGP05129 697 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 VAV1P15498 845 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 MGAT1P26572 445 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 RPS6KA3P51812 740 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 EPHB1P54762 984 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 CREMQ03060 361 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 KLF10Q13118 480 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 LSAMPQ13449 338 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 PAFAH1B3Q15102 231 aaKnown RBP13.46□□□□□ -0.25
LINC00343-203ENST00000454555 PDK3Q15120 406 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 TRIP10Q15642 601 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 PSMD5Q16401 504 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 CTXN3Q4LDR2 81 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 HSP90AA5PQ58FG0 334 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 C16orf46Q6P387 395 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 PRSS55Q6UWB4 352 aaPredicted RBP13.46□□□□□ -0.25
LINC00343-203ENST00000454555 TMC7Q7Z402 723 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 SLC25A41Q8N5S1 370 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 OR10T2Q8NGX3 314 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 SLC7A14Q8TBB6 771 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 TNIP3Q96KP6 325 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 MRPL40Q9NQ50 206 aaKnown RBP13.46□□□□□ -0.25
LINC00343-203ENST00000454555 SNX15Q9NRS6 342 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 TMEM216Q9P0N5 145 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 FNIP2Q9P278 1114 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 ADAMTS6Q9UKP5 1117 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 FZD10Q9ULW2 581 aa13.46□□□□□ -0.25
LINC00343-203ENST00000454555 RGSL1A5PLK6 1076 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 RNF103O00237 685 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 HCRTO43612 131 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 CXCL14O95715 111 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 PDGFRBP09619 1106 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 NCF2P19878 526 aaPredicted RBP13.45□□□□□ -0.26
LINC00343-203ENST00000454555 GLDCP23378 1020 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 MATKP42679 507 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 POLD2P49005 469 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 ZNF135P52742 658 aaPredicted RBP13.45□□□□□ -0.26
LINC00343-203ENST00000454555 IFRD2Q12894 506 aaPredicted RBP13.45□□□□□ -0.26
LINC00343-203ENST00000454555 MSLNQ13421 630 aaPredicted RBP13.45□□□□□ -0.26
LINC00343-203ENST00000454555 ADRM1Q16186 407 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 SLC5A9Q2M3M2 681 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 SLC25A52Q3SY17 297 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 SFT2D3Q587I9 215 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 RALGPS1Q5JS13 557 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 INTS6LQ5JSJ4 861 aaKnown RBP13.45□□□□□ -0.26
LINC00343-203ENST00000454555 SLC8B1Q6J4K2 584 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 FAM171BQ6P995 826 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 CLEC14AQ86T13 490 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 SCUBE3Q8IX30 993 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 PQLC1Q8N2U9 271 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 CPSF7Q8N684 471 aaKnown RBP13.45□□□□□ -0.26
LINC00343-203ENST00000454555 MRPL43Q8N983 215 aaKnown RBP13.45□□□□□ -0.26
LINC00343-203ENST00000454555 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.45□□□□□ -0.26
LINC00343-203ENST00000454555 PKMYT1Q99640 499 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 TCF25Q9BQ70 676 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 ILKAPQ9H0C8 392 aaPredicted RBP13.45□□□□□ -0.26
LINC00343-203ENST00000454555 ZCWPW1Q9H0M4 648 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 COG4Q9H9E3 785 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 PNPOQ9NVS9 261 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 DTNAQ9Y4J8 743 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 EPOPA6NHQ4 379 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 PENKP01210 267 aaPredicted RBP13.45□□□□□ -0.26
LINC00343-203ENST00000454555 PTPN1P18031 435 aaKnown RBP13.45□□□□□ -0.26
LINC00343-203ENST00000454555 GRIA1P42261 906 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 AQP4P55087 323 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 TSPY1Q01534 308 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 RFTN1Q14699 578 aaPredicted RBP13.45□□□□□ -0.26
LINC00343-203ENST00000454555 SH2D4BQ5SQS7 431 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 UGT2A3Q6UWM9 527 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 RSPO2Q6UXX9 243 aaPredicted RBP13.45□□□□□ -0.26
LINC00343-203ENST00000454555 FRMD7Q6ZUT3 714 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 TMEM135Q86UB9 458 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 DCP1BQ8IZD4 617 aaKnown RBP13.45□□□□□ -0.26
LINC00343-203ENST00000454555 POU5F2Q8N7G0 328 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 C12orf29Q8N999 325 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 ADCY4Q8NFM4 1077 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 NAT14Q8WUY8 206 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 DGCR14Q96DF8 476 aaKnown RBP13.45□□□□□ -0.26
LINC00343-203ENST00000454555 P2RY11Q96G91 374 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 TSNARE1Q96NA8 513 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 CLSTN3Q9BQT9 956 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 DPEP3Q9H4B8 488 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 CRTAC1Q9NQ79 661 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 TCF7L2Q9NQB0 619 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 PTTG2Q9NZH5 202 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 BFARQ9NZS9 450 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 RAP2CQ9Y3L5 183 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 RPS6KL1Q9Y6S9 549 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 VWA8A3KMH1 1905 aa13.45□□□□□ -0.26
LINC00343-203ENST00000454555 TSC2P49815 1807 aa13.44□□□□□ -0.26
LINC00343-203ENST00000454555 RANBP2P49792 3224 aaKnown RBP13.44□□□□□ -0.26
LINC00343-203ENST00000454555 H3BNX3 289 aa13.44□□□□□ -0.26
LINC00343-203ENST00000454555 PIK3R2O00459 728 aa13.44□□□□□ -0.26
LINC00343-203ENST00000454555 SOX1O00570 391 aaPredicted RBP13.44□□□□□ -0.26
LINC00343-203ENST00000454555 HDAC3O15379 428 aa13.44□□□□□ -0.26
LINC00343-203ENST00000454555 DCXO43602 365 aa13.44□□□□□ -0.26
LINC00343-203ENST00000454555 DAB1O75553 588 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms