RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 GIPC1O14908 333 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 KPNA6O60684 536 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 RANBP1P43487 201 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 RAB27AP51159 221 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 RENBPP51606 427 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 LPCAT4Q643R3 524 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 LINGO4Q6UY18 593 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 DENND1CQ8IV53 801 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 GABPB2Q8TAK5 448 aaPredicted RBP12.1□□□□□ -0.47
SMPD4-213ENST00000454468 SLC9A7Q96T83 725 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 RTP3Q9BQQ7 232 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 C11orf84Q9BUA3 381 aaPredicted RBP12.1□□□□□ -0.47
SMPD4-213ENST00000454468 FAM96AQ9H5X1 160 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 TBC1D13Q9NVG8 400 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 RRN3Q9NYV6 651 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 MID2Q9UJV3 735 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 MAGEB16A2A368 324 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 TLR5O60602 858 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 STAMBPO95630 424 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 POLE2P56282 527 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 GALNT2Q10471 571 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 NFE2Q16621 373 aaPredicted RBP12.1□□□□□ -0.47
SMPD4-213ENST00000454468 ATP6V0D2Q8N8Y2 350 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 NTAN1Q96AB6 310 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 ESAMQ96AP7 390 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 VAT1Q99536 393 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 ARHGAP26Q9UNA1 814 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 ZCWPW2A0A1B0GU75 182 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 STX16-NPEPL1H3BU86 382 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 TPST1O60507 370 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 SMIM24O75264 130 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 MPOP05164 745 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 TFEBP19484 476 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 SERPINH1P50454 418 aaKnown RBP12.1□□□□□ -0.47
SMPD4-213ENST00000454468 SP3Q02447 781 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 NIPAL4Q0D2K0 466 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 PDAP1Q13442 181 aaKnown RBP12.1□□□□□ -0.47
SMPD4-213ENST00000454468 CLEC6AQ6EIG7 209 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 PIM3Q86V86 326 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 CEP97Q8IW35 865 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 MAPK15Q8TD08 544 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 ACMSDQ8TDX5 336 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 ATP6V1E2Q96A05 226 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 PIF1Q9H611 641 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 GKN1Q9NS71 199 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 PLK2Q9NYY3 685 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 TLL2Q9Y6L7 1015 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 V9GYQ6 96 aa12.1□□□□□ -0.47
SMPD4-213ENST00000454468 LUC7L3O95232 432 aaKnown RBP12.09□□□□□ -0.47
SMPD4-213ENST00000454468 SCNN1AP37088 669 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 RPL14P50914 215 aaKnown RBP12.09□□□□□ -0.47
SMPD4-213ENST00000454468 ACLYP53396 1101 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 RAB10P61026 200 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 MRPS22P82650 360 aaKnown RBP12.09□□□□□ -0.47
SMPD4-213ENST00000454468 SEMG2Q02383 582 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 KLC1Q07866 573 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 GPR158Q5T848 1215 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 SLC24A5Q71RS6 500 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 UCMAQ8WVF2 138 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 RCN3Q96D15 328 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 SMIM14Q96QK8 99 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 NPAS2Q99743 824 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 RHOJQ9H4E5 214 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 KCNU1A8MYU2 1149 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 B4GALT3O60512 393 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 HDCP19113 662 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 RPS24P62847 133 aaKnown RBP12.09□□□□□ -0.47
SMPD4-213ENST00000454468 ZRANB3Q5FWF4 1079 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 RASIP1Q5U651 963 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 FRMD7Q6ZUT3 714 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 TMCO2Q7Z6W1 182 aaPredicted RBP12.09□□□□□ -0.47
SMPD4-213ENST00000454468 MON1AQ86VX9 555 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 ZC3HC1Q86WB0 502 aaKnown RBP12.09□□□□□ -0.47
SMPD4-213ENST00000454468 BBS5Q8N3I7 341 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 AFAP1L2Q8N4X5 818 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 HEXDCQ8WVB3 486 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 PTCD3Q96EY7 689 aaKnown RBP12.09□□□□□ -0.47
SMPD4-213ENST00000454468 TRIM62Q9BVG3 475 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 GPR62Q9BZJ7 368 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 ZYG11BQ9C0D3 744 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 CDH19Q9H159 772 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 VCXQ9H320 206 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 CASS4Q9NQ75 786 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 RGS18Q9NS28 235 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 OSER1Q9NX31 292 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 NCKIPSDQ9NZQ3 722 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 SCOCQ9UIL1 159 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 LAMA2P24043 3122 aaKnown RBP12.09□□□□□ -0.47
SMPD4-213ENST00000454468 TTC36A6NLP5 189 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 SUPT3HB4E1H0 165 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 F5H5T6 163 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 MATN3O15232 486 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 SUPT3HO75486 399 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 COX4I1P13073 169 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 HOXD8P13378 290 aaPredicted RBP12.09□□□□□ -0.47
SMPD4-213ENST00000454468 FMO4P31512 558 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 OR1D2P34982 312 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 AGKQ53H12 422 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 LRRC8EQ6NSJ5 796 aa12.09□□□□□ -0.47
SMPD4-213ENST00000454468 TIGD7Q6NT04 549 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms