RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 IGSF21Q96ID5 467 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 CLSTN3Q9BQT9 956 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 TMEM175Q9BSA9 504 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 DONSONQ9NYP3 566 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 FBXO5Q9UKT4 447 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 MMP2P08253 660 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 PTPN4P29074 926 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 TUFMP49411 452 aaKnown RBP11.9□□□□□ -0.5
VTA1-203ENST00000452973 ERFP50548 548 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 ABCE1P61221 599 aaKnown RBP11.9□□□□□ -0.5
VTA1-203ENST00000452973 SIRPB2Q5JXA9 342 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 STXBP5Q5T5C0 1151 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 SNX30Q5VWJ9 437 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 RINLQ6ZS11 566 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 TREML1Q86YW5 311 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 RAB3IL1Q8TBN0 382 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 DIS3LQ8TF46 1054 aaKnown RBP11.9□□□□□ -0.5
VTA1-203ENST00000452973 FAM136AQ96C01 138 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 NXNL1Q96CM4 212 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 CYP2S1Q96SQ9 504 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 MIPEPQ99797 713 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 ACE2Q9BYF1 805 aaPredicted RBP11.9□□□□□ -0.5
VTA1-203ENST00000452973 PAK6Q9NQU5 681 aaPredicted RBP11.9□□□□□ -0.5
VTA1-203ENST00000452973 SAR1AQ9NR31 198 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 MAN1C1Q9NR34 630 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.9□□□□□ -0.5
VTA1-203ENST00000452973 ACOT9Q9Y305 439 aa11.9□□□□□ -0.5
VTA1-203ENST00000452973 COL4A4P53420 1690 aaPredicted RBP11.9□□□□□ -0.5
VTA1-203ENST00000452973 KIAA0100Q14667 2235 aaKnown RBP11.89□□□□□ -0.51
VTA1-203ENST00000452973 HEATR9A2RTY3 570 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 C2orf78A6NCI8 922 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 G3V2L1 256 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 PRRG1O14668 218 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 CHUKO15111 745 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 ACSL4O60488 711 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 IGLV3-27P01718 113 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 SLC35E2BP0CK96 405 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 STMN1P16949 149 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 SGSHP51688 502 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 PRAMEP78395 509 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 CFAP157Q5JU67 520 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 HECTD3Q5T447 861 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 RBM20Q5T481 1227 aaKnown RBP11.89□□□□□ -0.51
VTA1-203ENST00000452973 HDAC10Q969S8 669 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 SORT1Q99523 831 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 RNF38Q9H0F5 515 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 TRPC7Q9HCX4 862 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 MTRRQ9UBK8 725 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 FNDC3AQ9Y2H6 1198 aaKnown RBP11.89□□□□□ -0.51
VTA1-203ENST00000452973 DOCK4Q8N1I0 1966 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 ZNF840PA6NDX5 716 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 DRGXA6NNA5 263 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 PRR5-ARHGAP8B1AHC4 643 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 CBX4O00257 560 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 IL1BP01584 269 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 KLKB1P03952 638 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 NCF2P19878 526 aaPredicted RBP11.89□□□□□ -0.51
VTA1-203ENST00000452973 CORO1AP31146 461 aaKnown RBP11.89□□□□□ -0.51
VTA1-203ENST00000452973 MAGEA12P43365 314 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 SLC11A2P49281 568 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 SCNN1BP51168 640 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 ARSDP51689 593 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 TAS2R39P59534 338 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 MXRA7P84157 204 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 ARHGAP8P85298 464 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 IL10RBQ08334 325 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 SMARCB1Q12824 385 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 UGP2Q16851 508 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 PARP15Q460N3 678 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 SLC8B1Q6J4K2 584 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 FSTL5Q8N475 847 aaPredicted RBP11.89□□□□□ -0.51
VTA1-203ENST00000452973 ZNF781Q8N8C0 355 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 INPP5DQ92835 1189 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 WBP2Q969T9 261 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 MCUR1Q96AQ8 359 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 TMEM169Q96HH4 297 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 TREX1Q9NSU2 369 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 TMEM51Q9NW97 253 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 NSMCE4AQ9NXX6 385 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 ZNF212Q9UDV6 495 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 CRYL1Q9Y2S2 319 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 ARL5AQ9Y689 179 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 H0Y3Z8 333 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 CCDC22O60826 627 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 CHRNGP07510 517 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 ZDHHC11BP0C7U3 371 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 GRK2P25098 689 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 ALDH1A3P47895 512 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 CD151P48509 253 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 NAGLUP54802 743 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 RING1Q06587 406 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 SLC12A1Q13621 1099 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 EML3Q32P44 896 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 CCNYL1Q8N7R7 359 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 FAM13CQ8NE31 585 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 FBXO27Q8NI29 283 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 ARRDC2Q8TBH0 407 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 PTCD3Q96EY7 689 aaKnown RBP11.89□□□□□ -0.51
VTA1-203ENST00000452973 PPP1R2P1Q96PQ5 205 aa11.89□□□□□ -0.51
VTA1-203ENST00000452973 POLR1EQ9GZS1 481 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms