RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 EPHA5P54756 1037 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 RPL10AP62906 217 aaKnown RBP10.87□□□□□ -0.67
PKP4-206ENST00000452162 ELF3P78545 371 aaPredicted RBP10.87□□□□□ -0.67
PKP4-206ENST00000452162 PRPSAP1Q14558 356 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 PRSS36Q5K4E3 855 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 SPDYAQ5MJ70 313 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 CERCAMQ5T4B2 595 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 PIK3R6Q5UE93 754 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 ZNF683Q8IZ20 524 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 ARHGAP18Q8N392 663 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 RTL3Q8N8U3 475 aaKnown RBP10.87□□□□□ -0.67
PKP4-206ENST00000452162 USP33Q8TEY7 942 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 C1orf74Q96LT6 269 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 CPNE1Q99829 537 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 TRIM55Q9BYV6 548 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 ASAH2Q9NR71 780 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 EMCNQ9ULC0 261 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 MAGED2Q9UNF1 606 aaPredicted RBP10.87□□□□□ -0.67
PKP4-206ENST00000452162 MRPS23Q9Y3D9 190 aaKnown RBP10.87□□□□□ -0.67
PKP4-206ENST00000452162 LOC730098B7Z3J9 87 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 MATN3O15232 486 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 BIRC5O15392 142 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 MOSPD3O75425 235 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 MOCS2O96007 188 aaPredicted RBP10.87□□□□□ -0.67
PKP4-206ENST00000452162 GSRP00390 522 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 BPGMP07738 259 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 NEFHP12036 1026 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 MAGEA12P43365 314 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 MLLT6P55198 1093 aaPredicted RBP10.87□□□□□ -0.67
PKP4-206ENST00000452162 KCNJ2P63252 427 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 PDE1CQ14123 709 aaPredicted RBP10.87□□□□□ -0.67
PKP4-206ENST00000452162 VEPH1Q14D04 833 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 SMAD1Q15797 465 aaKnown RBP10.87□□□□□ -0.67
PKP4-206ENST00000452162 GRTP1Q5TC63 336 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 NAPEPLDQ6IQ20 393 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 KYAT3Q6YP21 454 aaKnown RBP10.87□□□□□ -0.67
PKP4-206ENST00000452162 GAREM2Q75VX8 874 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 TBC1D1Q86TI0 1168 aaPredicted RBP10.87□□□□□ -0.67
PKP4-206ENST00000452162 ITIH5Q86UX2 942 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 ST13P5Q8NFI4 369 aaPredicted RBP10.87□□□□□ -0.67
PKP4-206ENST00000452162 RAB3IL1Q8TBN0 382 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 ISL2Q96A47 359 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 FCRL5Q96RD9 977 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 UHRF1Q96T88 793 aaPredicted RBP10.87□□□□□ -0.67
PKP4-206ENST00000452162 APOL2Q9BQE5 337 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 IL22Q9GZX6 179 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 KCNK13Q9HB14 408 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 GLOD4Q9HC38 313 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 ARHGEF3Q9NR81 526 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 UBP1Q9NZI7 540 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 DCTN4Q9UJW0 460 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 SOX13Q9UN79 622 aa10.87□□□□□ -0.67
PKP4-206ENST00000452162 MAGEB16A2A368 324 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 C19orf67A6NJJ6 358 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 SLC38A8A6NNN8 435 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 AP3B1O00203 1094 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 MGRN1O60291 552 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 GLRA3O75311 464 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 DLDP09622 509 aaKnown RBP10.86□□□□□ -0.67
PKP4-206ENST00000452162 CEBPBP17676 345 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 BST1Q10588 318 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 CDH17Q12864 832 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 TAF12Q16514 161 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 DBN1Q16643 649 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 LINC00523Q86TU6 105 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 FGF13Q92913 245 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 E2F7Q96AV8 911 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 KLHL29Q96CT2 875 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 MFSD3Q96ES6 412 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 C7orf26Q96N11 449 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 RBBP8Q99708 897 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 NOL6Q9H6R4 1146 aaKnown RBP10.86□□□□□ -0.67
PKP4-206ENST00000452162 IL21Q9HBE4 155 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 TXLNGQ9NUQ3 528 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 TRIM33Q9UPN9 1127 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 NUMBLQ9Y6R0 609 aa10.86□□□□□ -0.67
PKP4-206ENST00000452162 A0A1W2PRU2 124 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 ATP9BO43861 1147 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 SNNO75324 88 aaPredicted RBP10.85□□□□□ -0.67
PKP4-206ENST00000452162 SLC2A3P11169 496 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 TPH1P17752 444 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 GABRR2P28476 465 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 TBX4P57082 545 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 OCRLQ01968 901 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 CHI3L2Q15782 390 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 TEDDM1Q5T9Z0 273 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 ATG16L1Q676U5 607 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 NUDCD3Q8IVD9 361 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 NPAS3Q8IXF0 933 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 PARP9Q8IXQ6 854 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 TDRD5Q8NAT2 981 aaKnown RBP10.85□□□□□ -0.67
PKP4-206ENST00000452162 SPATA22Q8NHS9 363 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 SHKBP1Q8TBC3 707 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 SPATA17Q96L03 361 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 MCMBPQ9BTE3 642 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 KIFC1Q9BW19 673 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 CHRAC1Q9NRG0 131 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 MPP6Q9NZW5 540 aa10.85□□□□□ -0.67
PKP4-206ENST00000452162 AAR2Q9Y312 384 aaKnown RBP10.85□□□□□ -0.67
PKP4-206ENST00000452162 PLIN3O60664 434 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms