RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 RHEBQ15382 184 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 VPS72Q15906 364 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 OCLNQ16625 522 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CYP1B1Q16678 543 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 KCTD19Q17RG1 926 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 FASTKD1Q53R41 847 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 PAGE2BQ5JRK9 111 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 GPRC6AQ5T6X5 926 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 HEATR6Q6AI08 1181 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 TIGD3Q6B0B8 471 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CTRB2Q6GPI1 263 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 LIN54Q6MZP7 749 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 UGT3A1Q6NUS8 523 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PGM2L1Q6PCE3 622 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 FAM131AQ6UXB0 335 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TMC4Q7Z404 712 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 LINC00523Q86TU6 105 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 UBQLNLQ8IYU4 475 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 FNDC5Q8NAU1 212 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 FBXO36Q8NEA4 188 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SUPT20HQ8NEM7 779 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SPATA20Q8TB22 786 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 FBXO30Q8TB52 745 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TRPM4Q8TD43 1214 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ZNF431Q8TF32 576 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 KCNN1Q92952 543 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 AZIN2Q96A70 460 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 AURKBQ96GD4 344 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 C9orf72Q96LT7 481 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 MBOAT7Q96N66 472 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 NEDD4LQ96PU5 975 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 NODALQ96S42 347 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SETDB2Q96T68 719 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SLC29A1Q99808 456 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TRIM62Q9BVG3 475 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SEZ6LQ9BYH1 1024 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ACTR6Q9GZN1 396 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 LACRTQ9GZZ8 138 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 KCNN2Q9H2S1 579 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 OPA3Q9H6K4 179 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 VRTNQ9H8Y1 702 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PRDM11Q9NQV5 511 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PDGFCQ9NRA1 345 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 FAM49BQ9NUQ9 324 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 INTS13Q9NVM9 706 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 GFOD1Q9NXC2 390 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 DCAF16Q9NXF7 216 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 XPR1Q9UBH6 696 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 GABBR1Q9UBS5 961 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 RPS6KA6Q9UK32 745 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 RUVBL1Q9Y265 456 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 RAP2CQ9Y3L5 183 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CEPT1Q9Y6K0 416 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ROBO3Q96MS0 1386 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PTPRJQ12913 1337 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ANKDD1BA6NHY2 528 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 OR6C70A6NIJ9 312 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 NEURL1BA8MQ27 555 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 H0YGN5 161 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TBX3O15119 743 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PROM1O43490 865 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 NMT2O60551 498 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CPNE3O75131 537 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 SOAT2O75908 522 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SLITRK5O94991 958 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 LSM8O95777 96 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 ANGPTL1O95841 491 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PGK2P07205 417 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 NUDT7P0C024 238 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 MTHFD1P11586 935 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 ITGA2P17301 1181 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PGAM1P18669 254 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CFL1P23528 166 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 VAMP1P23763 118 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 HLA-FP30511 346 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SFNP31947 248 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CRHR1P34998 444 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 RORCP51449 518 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TPMTP51580 245 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 MAZP56270 477 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 TXNL4AP83876 142 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 C19orf57Q0VDD7 668 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ILF3Q12906 894 aaKnown RBP eCLIP2.22□□□□□ -2.054e-6■■■■□ 20.7
USP53-202ENST00000450251 PTP4A2Q12974 167 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 KCNJ8Q15842 424 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 NOMO2Q5JPE7 1267 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ACAD10Q6JQN1 1059 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TMEM214Q6NUQ4 689 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 UGT2A3Q6UWM9 527 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SMIM15Q7Z3B0 74 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 METTL3Q86U44 580 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 TREML1Q86YW5 311 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 FAM20CQ8IXL6 584 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.22□□□□□ -2.05
USP53-202ENST00000450251 WDSUB1Q8N9V3 476 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 GATAD2BQ8WXI9 593 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 FIG4Q92562 907 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SGK3Q96BR1 496 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 MTMR8Q96EF0 704 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 FEM1CQ96JP0 617 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms