RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 A0A1W2PQJ5 194 aa15.49■□□□□ 0.07
CHD3-205ENST00000449744 ARHGAP42A6NI28 874 aa15.49■□□□□ 0.07
CHD3-205ENST00000449744 SDC3O75056 442 aa15.49■□□□□ 0.07
CHD3-205ENST00000449744 DKK1O94907 266 aa15.49■□□□□ 0.07
CHD3-205ENST00000449744 XPAP23025 273 aaPredicted RBP15.49■□□□□ 0.07
CHD3-205ENST00000449744 MIPP30301 263 aa15.49■□□□□ 0.07
CHD3-205ENST00000449744 ABL2P42684 1182 aa15.49■□□□□ 0.07
CHD3-205ENST00000449744 CA9Q16790 459 aa15.49■□□□□ 0.07
CHD3-205ENST00000449744 HS1BP3Q53T59 392 aa15.49■□□□□ 0.07
CHD3-205ENST00000449744 PPP6R3Q5H9R7 873 aaPredicted RBP15.49■□□□□ 0.07
CHD3-205ENST00000449744 GCNT7Q6ZNI0 430 aa15.49■□□□□ 0.07
CHD3-205ENST00000449744 PTAR1Q7Z6K3 402 aaPredicted RBP15.49■□□□□ 0.07
CHD3-205ENST00000449744 TTC7BQ86TV6 843 aa15.49■□□□□ 0.07
CHD3-205ENST00000449744 ARFGAP1Q8N6T3 406 aa15.49■□□□□ 0.07
CHD3-205ENST00000449744 NETO2Q8NC67 525 aa15.49■□□□□ 0.07
CHD3-205ENST00000449744 OR13H1Q8NG92 308 aa15.49■□□□□ 0.07
CHD3-205ENST00000449744 CPLX3Q8WVH0 158 aa15.49■□□□□ 0.07
CHD3-205ENST00000449744 IQCDQ96DY2 449 aa15.49■□□□□ 0.07
CHD3-205ENST00000449744 CELF6Q96J87 481 aaKnown RBP15.49■□□□□ 0.07
CHD3-205ENST00000449744 PEBP4Q96S96 227 aa15.49■□□□□ 0.07
CHD3-205ENST00000449744 TRIM7Q9C029 511 aa15.49■□□□□ 0.07
CHD3-205ENST00000449744 ISCUQ9H1K1 167 aa15.49■□□□□ 0.07
CHD3-205ENST00000449744 KLHL11Q9NVR0 708 aa15.49■□□□□ 0.07
CHD3-205ENST00000449744 HS3ST3A1Q9Y663 406 aa15.49■□□□□ 0.07
CHD3-205ENST00000449744 CFAP47Q6ZTR5 3102 aa15.48■□□□□ 0.07
CHD3-205ENST00000449744 IGLON5A6NGN9 336 aa15.48■□□□□ 0.07
CHD3-205ENST00000449744 FPGTO14772 594 aa15.48■□□□□ 0.07
CHD3-205ENST00000449744 SERPING1P05155 500 aa15.48■□□□□ 0.07
CHD3-205ENST00000449744 CYTH1Q15438 398 aa15.48■□□□□ 0.07
CHD3-205ENST00000449744 DHRS13Q6UX07 377 aa15.48■□□□□ 0.07
CHD3-205ENST00000449744 Q6ZSR6 202 aa15.48■□□□□ 0.07
CHD3-205ENST00000449744 RFX8Q6ZV50 586 aa15.48■□□□□ 0.07
CHD3-205ENST00000449744 ABI3BPQ7Z7G0 1075 aa15.48■□□□□ 0.07
CHD3-205ENST00000449744 DCP2Q8IU60 420 aaKnown RBP15.48■□□□□ 0.07
CHD3-205ENST00000449744 PSTKQ8IV42 348 aaKnown RBP15.48■□□□□ 0.07
CHD3-205ENST00000449744 SYN2Q92777 582 aaPredicted RBP15.48■□□□□ 0.07
CHD3-205ENST00000449744 EXOC2Q96KP1 924 aa15.48■□□□□ 0.07
CHD3-205ENST00000449744 KCTD15Q96SI1 283 aaPredicted RBP15.48■□□□□ 0.07
CHD3-205ENST00000449744 SLC39A8Q9C0K1 460 aa15.48■□□□□ 0.07
CHD3-205ENST00000449744 LRRC19Q9H756 370 aa15.48■□□□□ 0.07
CHD3-205ENST00000449744 IPO11Q9UI26 975 aaKnown RBP15.48■□□□□ 0.07
CHD3-205ENST00000449744 ITM2BQ9Y287 266 aa15.48■□□□□ 0.07
CHD3-205ENST00000449744 MFHAS1Q9Y4C4 1052 aa15.48■□□□□ 0.07
CHD3-205ENST00000449744 PCDHGA1Q9Y5H4 931 aa15.48■□□□□ 0.07
CHD3-205ENST00000449744 COL5A1P20908 1838 aaPredicted RBP15.47■□□□□ 0.07
CHD3-205ENST00000449744 PRAMEF11O60813 436 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 LRCH4O75427 683 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 RFPL3O75679 317 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 CDK4P11802 303 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 ERCC2P18074 760 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 PBX1P40424 430 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 PAPOLAP51003 745 aaKnown RBP15.47■□□□□ 0.07
CHD3-205ENST00000449744 ZNF135P52742 658 aaPredicted RBP15.47■□□□□ 0.07
CHD3-205ENST00000449744 ZBED6P86452 979 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 DNAJC3Q13217 504 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 FGL2Q14314 439 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 GRM3Q14832 879 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 ACAP1Q15027 740 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 NFKBIBQ15653 356 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 CFAP58Q5T655 872 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 KYAT3Q6YP21 454 aaKnown RBP15.47■□□□□ 0.07
CHD3-205ENST00000449744 CXorf40AQ8TE69 158 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 ASB12Q8WXK4 309 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 BMFQ96LC9 184 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 LENG8Q96PV6 779 aaPredicted RBP15.47■□□□□ 0.07
CHD3-205ENST00000449744 TRPM6Q9BX84 2022 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 C1QTNF2Q9BXJ5 285 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 CPEB1Q9BZB8 566 aaKnown RBP15.47■□□□□ 0.07
CHD3-205ENST00000449744 ZWILCHQ9H900 591 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 SP110Q9HB58 689 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 IFNKQ9P0W0 207 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 LHX3Q9UBR4 397 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 GGT7Q9UJ14 662 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 CAPN11Q9UMQ6 739 aa15.47■□□□□ 0.07
CHD3-205ENST00000449744 LUC7L2Q9Y383 392 aaKnown RBP15.47■□□□□ 0.07
CHD3-205ENST00000449744 J3KR12 359 aa15.46■□□□□ 0.07
CHD3-205ENST00000449744 DFFAO00273 331 aa15.46■□□□□ 0.07
CHD3-205ENST00000449744 RAD51BO15315 384 aa15.46■□□□□ 0.07
CHD3-205ENST00000449744 TPM3P06753 285 aa15.46■□□□□ 0.07
CHD3-205ENST00000449744 C1SP09871 688 aa15.46■□□□□ 0.07
CHD3-205ENST00000449744 CKMT2P17540 419 aa15.46■□□□□ 0.07
CHD3-205ENST00000449744 PCK1P35558 622 aa15.46■□□□□ 0.07
CHD3-205ENST00000449744 RABIFP47224 123 aa15.46■□□□□ 0.07
CHD3-205ENST00000449744 PIGHQ14442 188 aaPredicted RBP15.46■□□□□ 0.07
CHD3-205ENST00000449744 SMAD1Q15797 465 aaKnown RBP15.46■□□□□ 0.07
CHD3-205ENST00000449744 SKOR2Q2VWA4 1001 aaPredicted RBP15.46■□□□□ 0.07
CHD3-205ENST00000449744 ZSCAN23Q3MJ62 389 aa15.46■□□□□ 0.07
CHD3-205ENST00000449744 LRRC73Q5JTD7 316 aa15.46■□□□□ 0.07
CHD3-205ENST00000449744 HGSNATQ68CP4 663 aa15.46■□□□□ 0.07
CHD3-205ENST00000449744 KANSL1Q7Z3B3 1105 aa15.46■□□□□ 0.07
CHD3-205ENST00000449744 DENND6BQ8NEG7 585 aa15.46■□□□□ 0.07
CHD3-205ENST00000449744 IFT43Q96FT9 208 aa15.46■□□□□ 0.07
CHD3-205ENST00000449744 C1QTNF7Q9BXJ2 289 aa15.46■□□□□ 0.07
CHD3-205ENST00000449744 CCDC86Q9H6F5 360 aaKnown RBP15.46■□□□□ 0.07
CHD3-205ENST00000449744 PDFQ9HBH1 243 aa15.46■□□□□ 0.07
CHD3-205ENST00000449744 DNAJC28Q9NX36 388 aa15.46■□□□□ 0.07
CHD3-205ENST00000449744 DKK3Q9UBP4 350 aa15.46■□□□□ 0.07
CHD3-205ENST00000449744 CHD6Q8TD26 2715 aa15.46■□□□□ 0.07
CHD3-205ENST00000449744 FAM208BQ5VWN6 2430 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 POM121BA6NF01 834 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms