RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 SPATA22Q8NHS9 363 aa12.89□□□□□ -0.35
HLA-DRB9-201ENST00000449413 EXOC2Q96KP1 924 aa12.89□□□□□ -0.35
HLA-DRB9-201ENST00000449413 TRMT61BQ9BVS5 477 aaKnown RBP12.89□□□□□ -0.35
HLA-DRB9-201ENST00000449413 CDC42EP4Q9H3Q1 356 aaKnown RBP12.89□□□□□ -0.35
HLA-DRB9-201ENST00000449413 SAYSD1Q9NPB0 183 aa12.89□□□□□ -0.35
HLA-DRB9-201ENST00000449413 VPS45Q9NRW7 570 aa12.89□□□□□ -0.35
HLA-DRB9-201ENST00000449413 SLC27A6Q9Y2P4 619 aa12.89□□□□□ -0.35
HLA-DRB9-201ENST00000449413 OTOL1A6NHN0 477 aaPredicted RBP12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 ARNTLO00327 626 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 TRIM24O15164 1050 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 PSMD3O43242 534 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 TULP3O75386 442 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 BANF1O75531 89 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 MMP2P08253 660 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 MLNP12872 115 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 SRCP12931 536 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 CR2P20023 1033 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 CD86P42081 329 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 CTSOP43234 321 aaPredicted RBP12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 RGRP47804 291 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 STK19P49842 368 aaPredicted RBP12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 PMS2P54278 862 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 RHOAP61586 193 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 SKOR1P84550 965 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 NIPAL4Q0D2K0 466 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 PDIA2Q13087 525 aaKnown RBP12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 NR1H3Q13133 447 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 MTM1Q13496 603 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 OLIG2Q13516 323 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 SPARCL1Q14515 664 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 CASP8Q14790 479 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 FASTKD3Q14CZ7 662 aaKnown RBP12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 CYTH1Q15438 398 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 UAP1Q16222 522 aaPredicted RBP12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 GEN1Q17RS7 908 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 MSS51Q4VC12 460 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 DNAJC21Q5F1R6 531 aaKnown RBP12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 SPDYCQ5MJ68 293 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 MBLAC2Q68D91 279 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 NAPEPLDQ6IQ20 393 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 C22orf39Q6P5X5 142 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 KDELC1Q6UW63 502 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 PRPF39Q86UA1 669 aaKnown RBP12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 ADIPOR2Q86V24 386 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 CAND1Q86VP6 1230 aaKnown RBP12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 RELL1Q8IUW5 271 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 ZBED8Q8IZ13 594 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 IPMKQ8NFU5 416 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 ARRDC2Q8TBH0 407 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 UBLCP1Q8WVY7 318 aaPredicted RBP12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 TADA1Q96BN2 335 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 SEMA3CQ99985 751 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 TBL1YQ9BQ87 522 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 WDR83Q9BRX9 315 aaKnown RBP12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 FICDQ9BVA6 458 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 FSD1LQ9BXM9 530 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 ZNF446Q9NWS9 450 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 UBP1Q9NZI7 540 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 HS3ST2Q9Y278 367 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 FCF1Q9Y324 198 aaKnown RBP12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 SCN8AQ9UQD0 1980 aa12.88□□□□□ -0.35
HLA-DRB9-201ENST00000449413 USP12O75317 370 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 PMPCBO75439 489 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 GJB3O75712 270 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 MT-CO1P00395 513 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 ASLP04424 464 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 CISD3P0C7P0 127 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 POLR2EP19388 210 aaKnown RBP12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 GJA4P35212 333 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 HSD17B3P37058 310 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 EIF2DP41214 584 aaKnown RBP12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 GRIA1P42261 906 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 MAGEA4P43358 317 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 PUM1Q14671 1186 aaKnown RBP eCLIP12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 ITPRIPL2Q3MIP1 535 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 BBS9Q3SYG4 887 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 LRRC8BQ6P9F7 803 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 TRMT10CQ7L0Y3 403 aaKnown RBP12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 HDXQ7Z353 690 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 LINC00523Q86TU6 105 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 SH2D3CQ8N5H7 860 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 ATP11CQ8NB49 1132 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 MRGPRX2Q96LB1 330 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 TTC25Q96NG3 672 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 NUDCD1Q96RS6 583 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 RPP25Q9BUL9 199 aaKnown RBP12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 FUT8Q9BYC5 575 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 SEMA4AQ9H3S1 761 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 BRD9Q9H8M2 597 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 SCUBE2Q9NQ36 999 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 CASS4Q9NQ75 786 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 GTSE1Q9NYZ3 720 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 NINJ2Q9NZG7 142 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 DEC1Q9P2X7 70 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 SPTBN2O15020 2390 aa12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 ZNF106Q9H2Y7 1883 aaKnown RBP12.87□□□□□ -0.35
HLA-DRB9-201ENST00000449413 TTC24A2A3L6 582 aaPredicted RBP12.86□□□□□ -0.35
HLA-DRB9-201ENST00000449413 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.86□□□□□ -0.35
HLA-DRB9-201ENST00000449413 K7ERQ8 282 aa12.86□□□□□ -0.35
HLA-DRB9-201ENST00000449413 INSIG1O15503 277 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms