RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 SPDYCQ5MJ68 293 aa19.51■□□□□ 0.71
RPS28-202ENST00000449223 SYCP2LQ5T4T6 812 aa19.51■□□□□ 0.71
RPS28-202ENST00000449223 NCEH1Q6PIU2 408 aa19.51■□□□□ 0.71
RPS28-202ENST00000449223 CENPUQ71F23 418 aa19.51■□□□□ 0.71
RPS28-202ENST00000449223 VOPP1Q96AW1 172 aa19.51■□□□□ 0.71
RPS28-202ENST00000449223 LRRC39Q96DD0 335 aa19.51■□□□□ 0.71
RPS28-202ENST00000449223 GDAP1L1Q96MZ0 367 aa19.51■□□□□ 0.71
RPS28-202ENST00000449223 P2RY13Q9BPV8 354 aa19.51■□□□□ 0.71
RPS28-202ENST00000449223 ARFGAP3Q9NP61 516 aa19.51■□□□□ 0.71
RPS28-202ENST00000449223 SCUBE2Q9NQ36 999 aa19.51■□□□□ 0.71
RPS28-202ENST00000449223 CASS4Q9NQ75 786 aa19.51■□□□□ 0.71
RPS28-202ENST00000449223 UBP1Q9NZI7 540 aa19.51■□□□□ 0.71
RPS28-202ENST00000449223 SLCO3A1Q9UIG8 710 aa19.51■□□□□ 0.71
RPS28-202ENST00000449223 ARIH1Q9Y4X5 557 aaPredicted RBP19.51■□□□□ 0.71
RPS28-202ENST00000449223 COL6A3P12111 3177 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 F5P12259 2224 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 WASH3PC4AMC7 463 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 GOLGA8MH3BSY2 632 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 GJB3O75712 270 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 IGSF6O95976 241 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 APODP05090 189 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 ASGR2P07307 311 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 TNFRSF4P43489 277 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 SOX9P48436 509 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 WNT3AP56704 352 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 ARMC3Q5W041 872 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 SRLQ86TD4 932 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 UCMAQ8WVF2 138 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 FEM1CQ96JP0 617 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 EXOC2Q96KP1 924 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 NSMCE3Q96MG7 304 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 TBL1YQ9BQ87 522 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 CPEB1Q9BZB8 566 aaKnown RBP19.5■□□□□ 0.71
RPS28-202ENST00000449223 PRDM6Q9NQX0 595 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 THEGQ9P2T0 379 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 PLA2G4CQ9UP65 541 aa19.5■□□□□ 0.71
RPS28-202ENST00000449223 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.49■□□□□ 0.71
RPS28-202ENST00000449223 TBC1D3BA6NDS4 549 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 NPC1O15118 1278 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 ALOX15BO15296 676 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 HNRNPLP14866 589 aaKnown RBP eCLIP19.49■□□□□ 0.71
RPS28-202ENST00000449223 GRIA1P42261 906 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 ZP2Q05996 745 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 CDH17Q12864 832 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 ENPP2Q13822 863 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 MSS51Q4VC12 460 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 FNBP1LQ5T0N5 605 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 DENND5AQ6IQ26 1287 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 IPMKQ8NFU5 416 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 CYB5D2Q8WUJ1 264 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 SORCS1Q8WY21 1168 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 SPOCK2Q92563 424 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 PWWP2AQ96N64 755 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 TUBGCP5Q96RT8 1024 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 TRIB3Q96RU7 358 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 FSD1LQ9BXM9 530 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 TDRD1Q9BXT4 1180 aaKnown RBP19.49■□□□□ 0.71
RPS28-202ENST00000449223 TMEM245Q9H330 911 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 THAP10Q9P2Z0 257 aaPredicted RBP19.49■□□□□ 0.71
RPS28-202ENST00000449223 SLC8A2Q9UPR5 921 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 PIAS3Q9Y6X2 628 aa19.49■□□□□ 0.71
RPS28-202ENST00000449223 SOCS5O75159 536 aa19.48■□□□□ 0.71
RPS28-202ENST00000449223 PMPCBO75439 489 aa19.48■□□□□ 0.71
RPS28-202ENST00000449223 CHRM1P11229 460 aaPredicted RBP19.48■□□□□ 0.71
RPS28-202ENST00000449223 GALK1P51570 392 aa19.48■□□□□ 0.71
RPS28-202ENST00000449223 ST8SIA6P61647 398 aa19.48■□□□□ 0.71
RPS28-202ENST00000449223 DHX9Q08211 1270 aaKnown RBP19.48■□□□□ 0.71
RPS28-202ENST00000449223 GRM3Q14832 879 aa19.48■□□□□ 0.71
RPS28-202ENST00000449223 CARD16Q5EG05 197 aa19.48■□□□□ 0.71
RPS28-202ENST00000449223 DNAJC21Q5F1R6 531 aaKnown RBP19.48■□□□□ 0.71
RPS28-202ENST00000449223 TXNDC11Q6PKC3 985 aa19.48■□□□□ 0.71
RPS28-202ENST00000449223 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.48■□□□□ 0.71
RPS28-202ENST00000449223 OR2A12Q8NGT7 310 aa19.48■□□□□ 0.71
RPS28-202ENST00000449223 TM6SF2Q9BZW4 377 aa19.48■□□□□ 0.71
RPS28-202ENST00000449223 FBRSL1Q9HCM7 1045 aaKnown RBP19.48■□□□□ 0.71
RPS28-202ENST00000449223 HCN2Q9UL51 889 aa19.48■□□□□ 0.71
RPS28-202ENST00000449223 DUSP12Q9UNI6 340 aa19.48■□□□□ 0.71
RPS28-202ENST00000449223 TEX264Q9Y6I9 313 aa19.48■□□□□ 0.71
RPS28-202ENST00000449223 TTC24A2A3L6 582 aaPredicted RBP19.47■□□□□ 0.71
RPS28-202ENST00000449223 C19orf67A6NJJ6 358 aa19.47■□□□□ 0.71
RPS28-202ENST00000449223 FZD6O60353 706 aa19.47■□□□□ 0.71
RPS28-202ENST00000449223 HLA-DPA1P20036 260 aa19.47■□□□□ 0.71
RPS28-202ENST00000449223 CA4P22748 312 aa19.47■□□□□ 0.71
RPS28-202ENST00000449223 CDK18Q07002 472 aa19.47■□□□□ 0.71
RPS28-202ENST00000449223 OLIG2Q13516 323 aa19.47■□□□□ 0.71
RPS28-202ENST00000449223 SPARCL1Q14515 664 aa19.47■□□□□ 0.71
RPS28-202ENST00000449223 TMEM196Q5HYL7 178 aa19.47■□□□□ 0.71
RPS28-202ENST00000449223 ATXN7L2Q5T6C5 722 aaPredicted RBP19.47■□□□□ 0.71
RPS28-202ENST00000449223 SFTPA1Q8IWL2 248 aa19.47■□□□□ 0.71
RPS28-202ENST00000449223 OR52K1Q8NGK4 314 aa19.47■□□□□ 0.71
RPS28-202ENST00000449223 KCNV2Q8TDN2 545 aa19.47■□□□□ 0.71
RPS28-202ENST00000449223 SIGLEC10Q96LC7 697 aa19.47■□□□□ 0.71
RPS28-202ENST00000449223 WDR83Q9BRX9 315 aaKnown RBP19.47■□□□□ 0.71
RPS28-202ENST00000449223 FICDQ9BVA6 458 aa19.47■□□□□ 0.71
RPS28-202ENST00000449223 TNKS2Q9H2K2 1166 aa19.47■□□□□ 0.71
RPS28-202ENST00000449223 HEBP1Q9NRV9 189 aa19.47■□□□□ 0.71
RPS28-202ENST00000449223 TTC34A8MYJ7 566 aa19.46■□□□□ 0.71
RPS28-202ENST00000449223 TRAFD1O14545 582 aaPredicted RBP19.46■□□□□ 0.71
RPS28-202ENST00000449223 HTRA2O43464 458 aaPredicted RBP19.46■□□□□ 0.71
RPS28-202ENST00000449223 NARSO43776 548 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms