RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 LPGAT1Q92604 370 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 VPS33AQ96AX1 596 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 DCPSQ96C86 337 aaKnown RBP19.39■□□□□ 0.69
HMGA1-205ENST00000447654 FBXL18Q96ME1 805 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 ILKAPQ9H0C8 392 aaPredicted RBP19.39■□□□□ 0.69
HMGA1-205ENST00000447654 PCDH12Q9NPG4 1184 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 CYP26B1Q9NR63 512 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 ADA2Q9NZK5 511 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 MTRRQ9UBK8 725 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 AGO2Q9UKV8 859 aaKnown RBP19.39■□□□□ 0.69
HMGA1-205ENST00000447654 PCDHA11Q9Y5I1 949 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 F8VP50 259 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 RFPL2O75678 378 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 PRKCGP05129 697 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 MAGEA3P43357 314 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 SERPINB10P48595 397 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 BST2Q10589 180 aaKnown RBP19.39■□□□□ 0.69
HMGA1-205ENST00000447654 BFSP2Q13515 415 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 HADHQ16836 314 aaKnown RBP19.39■□□□□ 0.69
HMGA1-205ENST00000447654 GJC2Q5T442 439 aaPredicted RBP19.39■□□□□ 0.69
HMGA1-205ENST00000447654 ABHD15Q6UXT9 468 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 TAS1R3Q7RTX0 852 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 SPRED1Q7Z699 444 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 DSG4Q86SJ6 1040 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 CBR4Q8N4T8 237 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 LEMD2Q8NC56 503 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 CMASQ8NFW8 434 aaPredicted RBP19.39■□□□□ 0.69
HMGA1-205ENST00000447654 MAPK15Q8TD08 544 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 RTP4Q96DX8 246 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 SLC45A3Q96JT2 553 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 MOCS1Q9NZB8 636 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 NPAP1Q9NZP6 1156 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 KLQ9UEF7 1012 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 PCDHGA7Q9Y5G6 932 aa19.39■□□□□ 0.69
HMGA1-205ENST00000447654 ARID2Q68CP9 1835 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 TCAF2A6NFQ2 919 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 A8MU76 341 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 SPATA31C2B4DYI2 1134 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 ABCB7O75027 752 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 IL18RAPO95256 599 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 RASAL1O95294 804 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 GSNP06396 782 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 GSTM2P28161 218 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 PRKCEQ02156 737 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 DNASE1L3Q13609 305 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 MAPRE2Q15555 327 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 ATP6AP1Q15904 470 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 NFE2Q16621 373 aaPredicted RBP19.38■□□□□ 0.69
HMGA1-205ENST00000447654 DNAJC24Q6P3W2 148 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 SV2AQ7L0J3 742 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 CAND1Q86VP6 1230 aaKnown RBP19.38■□□□□ 0.69
HMGA1-205ENST00000447654 SLC22A16Q86VW1 577 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 MAP4K3Q8IVH8 894 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 DHRSXQ8N5I4 330 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 LSMEM1Q8N8F7 131 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 SLC43A3Q8NBI5 491 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 EBNA1BP2Q99848 306 aaKnown RBP19.38■□□□□ 0.69
HMGA1-205ENST00000447654 CLPBQ9H078 707 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 FANCEQ9HB96 536 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 CCM2LQ9NUG4 571 aaPredicted RBP19.38■□□□□ 0.69
HMGA1-205ENST00000447654 IFT80Q9P2H3 777 aaPredicted RBP19.38■□□□□ 0.69
HMGA1-205ENST00000447654 SLC9A2Q9UBY0 812 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 UGT2A1Q9Y4X1 527 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 PTPRFP10586 1907 aa19.38■□□□□ 0.69
HMGA1-205ENST00000447654 ADM5C9JUS6 153 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 STX16-NPEPL1H3BU86 382 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 SNPHO15079 494 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 ALDOAP04075 364 aaKnown RBP19.37■□□□□ 0.69
HMGA1-205ENST00000447654 MSL3P1P0C860 447 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 BMP1P13497 986 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 KDELR1P24390 212 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 NR4A2P43354 598 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 DYNLT1P63172 113 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 TNK2Q07912 1038 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 STX5Q13190 355 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 TMTC4Q5T4D3 741 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 SEL1L3Q68CR1 1132 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 TXNRD3NBQ6F5E7 133 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 DCUN1D2Q6PH85 259 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 DARS2Q6PI48 645 aaKnown RBP19.37■□□□□ 0.69
HMGA1-205ENST00000447654 CLIP4Q8N3C7 705 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 RDM1Q8NG50 284 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 CSF3RQ99062 836 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 SLC39A3Q9BRY0 314 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 SEZ6LQ9BYH1 1024 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 SNX25Q9H3E2 840 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 HOXC10Q9NYD6 342 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 SAE1Q9UBE0 346 aaPredicted RBP19.37■□□□□ 0.69
HMGA1-205ENST00000447654 RAP2CQ9Y3L5 183 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 H0YAE9 185 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 UGT2B11O75310 529 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 DMP1Q13316 513 aaPredicted RBP19.37■□□□□ 0.69
HMGA1-205ENST00000447654 BOLA3Q53S33 107 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 SAMD4BQ5PRF9 694 aaKnown RBP19.37■□□□□ 0.69
HMGA1-205ENST00000447654 RNF19BQ6ZMZ0 732 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 LINC00523Q86TU6 105 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 SLC51BQ86UW2 128 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 GRPEL2Q8TAA5 225 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 AFG1LQ8WV93 481 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 NTPCRQ9BSD7 190 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms