RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 STRADAQ7RTN6 431 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 SCD5Q86SK9 330 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 CMTM8Q8IZV2 173 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 SIX5Q8N196 739 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 VN1R2Q8NFZ6 395 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 PPP1R14CQ8TAE6 165 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 SHKBP1Q8TBC3 707 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 FGF13Q92913 245 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 TRMT2BQ96GJ1 504 aaKnown RBP6.03□□□□□ -1.44
PROM1-201ENST00000447510 MUC3BQ9H195 1237 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 CATSPERBQ9H7T0 1116 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 FBXL21Q9UKT6 434 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 AK5Q9Y6K8 562 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 SIP14410 1827 aa6.03□□□□□ -1.44
PROM1-201ENST00000447510 NCANO14594 1321 aa6.02□□□□□ -1.44
PROM1-201ENST00000447510 CLUHO75153 1309 aa6.02□□□□□ -1.44
PROM1-201ENST00000447510 C15orf38-AP3S2A0A0A6YYH1 394 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 SPECC1L-ADORA2AF8WAN1 911 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 TNFRSF10BO14763 440 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 PEX1O43933 1283 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 EDF1O60869 148 aaKnown RBP6.02□□□□□ -1.45
PROM1-201ENST00000447510 PAGE1O75459 146 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 MYL2P10916 166 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 KRT4P19013 534 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 VIPR2P41587 438 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 HALP42357 657 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 PTPN9P43378 593 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 RXRGP48443 463 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 CD151P48509 253 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 IRX4P78413 519 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 ITKQ08881 620 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 SH3PXD2AQ5TCZ1 1133 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 TMEM214Q6NUQ4 689 aaKnown RBP6.02□□□□□ -1.45
PROM1-201ENST00000447510 C16orf87Q6PH81 154 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 GAREM2Q75VX8 874 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 ARPINQ7Z6K5 226 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 TFAP2DQ7Z6R9 452 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 CPNE8Q86YQ8 564 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 ANKMY2Q8IV38 441 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 RCOR2Q8IZ40 523 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 RYBPQ8N488 228 aaPredicted RBP6.02□□□□□ -1.45
PROM1-201ENST00000447510 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.02□□□□□ -1.45
PROM1-201ENST00000447510 CELF5Q8N6W0 485 aaKnown RBP6.02□□□□□ -1.45
PROM1-201ENST00000447510 ZNF75CPQ92670 426 aaPredicted RBP6.02□□□□□ -1.45
PROM1-201ENST00000447510 HES6Q96HZ4 224 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 RBM15Q96T37 977 aaKnown RBP eCLIP6.02□□□□□ -1.45
PROM1-201ENST00000447510 TSSK1BQ9BXA7 367 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 TMEM120AQ9BXJ8 343 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 PAIP1Q9H074 479 aaKnown RBP6.02□□□□□ -1.45
PROM1-201ENST00000447510 DUS2Q9NX74 493 aaKnown RBP6.02□□□□□ -1.45
PROM1-201ENST00000447510 PLK2Q9NYY3 685 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 NINJ2Q9NZG7 142 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 TBC1D14Q9P2M4 693 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 OR12D3Q9UGF7 316 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 CDH22Q9UJ99 828 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 USP3Q9Y6I4 520 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 HHLA1C9JL84 531 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 PDLIM1O00151 329 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 DFFAO00273 331 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 CES2O00748 559 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 FCHO1O14526 889 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 IRAK2O43187 625 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 LINC00271P0C7V0 271 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 HMGA1P17096 107 aaKnown RBP6.02□□□□□ -1.45
PROM1-201ENST00000447510 PEX2P28328 305 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 PMLP29590 882 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 ADRA1BP35368 520 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 CNGA3Q16281 694 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 NADK2Q4G0N4 442 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 SLC45A4Q5BKX6 768 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 RAB41Q5JT25 222 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 BRMS1LQ5PSV4 323 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 PTCRAQ6ISU1 281 aaPredicted RBP6.02□□□□□ -1.45
PROM1-201ENST00000447510 RASGEF1CQ8N431 466 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 C10orf82Q8WW14 230 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 SMARCD2Q92925 531 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 BTN2A3PQ96KV6 586 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 FCRL2Q96LA5 508 aaPredicted RBP6.02□□□□□ -1.45
PROM1-201ENST00000447510 SRPK1Q96SB4 655 aaKnown RBP6.02□□□□□ -1.45
PROM1-201ENST00000447510 KXD1Q9BQD3 176 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 BBS2Q9BXC9 721 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 TXLNGYQ9BZA5 131 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 EURLQ9NYK6 297 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 CDH7Q9ULB5 785 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 COG5Q9UP83 839 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 IKBKGQ9Y6K9 419 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 SMIM31A0A1B0GVY4 71 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 A0A1W2PPM1 405 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 LEFTY2O00292 366 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 ACSL4O60488 711 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 F11P03951 625 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 CDK4P11802 303 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 VCLP18206 1134 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 GDI1P31150 447 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 NNMTP40261 264 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 GRIA2P42262 883 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 VCPP55072 806 aaKnown RBP6.02□□□□□ -1.45
PROM1-201ENST00000447510 PITX1P78337 314 aaPredicted RBP6.02□□□□□ -1.45
PROM1-201ENST00000447510 RASA2Q15283 850 aa6.02□□□□□ -1.45
PROM1-201ENST00000447510 ATP13A4Q4VNC1 1196 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms