RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	BTRC	Q9Y297	605 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	TRIM17	Q9Y577	477 aa		12.68	□□□□□ -0.38
DDR1-238	ENST00000446312	RNF103-CHMP3	A0A140T963	221 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	KPNA7	A9QM74	516 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	NR5A2	O00482	541 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	XPOT	O43592	962 aa	Known RBP	12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	OXSR1	O95747	527 aa	Predicted RBP	12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	RXRG	P48443	463 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	PSME3	P61289	254 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	NEDD8	Q15843	81 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	SDHAF4	Q5VUM1	108 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	AAGAB	Q6PD74	315 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	LBX2	Q6XYB7	198 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	B3GNT6	Q6ZMB0	384 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	TFAP2D	Q7Z6R9	452 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	LPP	Q93052	612 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	PRICKLE1	Q96MT3	831 aa	Predicted RBP	12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	CYP2S1	Q96SQ9	504 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	SERPINI1	Q99574	410 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	ARMC7	Q9H6L4	198 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	MPP6	Q9NZW5	540 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	HBP1	O60381	514 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	MAN1A2	O60476	641 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	SUPT7L	O94864	414 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	TPSB2	P20231	275 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	CD68	P34810	354 aa	Predicted RBP	12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	SLC7A2	P52569	658 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	TAS2R39	P59534	338 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	TPSAB1	Q15661	275 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	ZNF423	Q2M1K9	1284 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	XKR5	Q6UX68	686 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	PIM3	Q86V86	326 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	OR52K2	Q8NGK3	314 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	SEPHS2	Q99611	448 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	HAUS8	Q9BT25	410 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	DNAJC28	Q9NX36	388 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	ERAP1	Q9NZ08	941 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	STK39	Q9UEW8	545 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	USP22	Q9UPT9	525 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	CARD8	Q9Y2G2	431 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	MGAM	O43451	1857 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	NUP214	P35658	2090 aa	Predicted RBP	12.67	□□□□□ -0.38
DDR1-238	ENST00000446312		A0A0U1RQS6	177 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	ZCWPW2	A0A1B0GU75	182 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	SOCS7	O14512	581 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	PARN	O95453	639 aa	Known RBP	12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	PGK1	P00558	417 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	MTHFD1	P11586	935 aa	Known RBP	12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	YBX3	P16989	372 aa	Known RBP eCLIP	12.67	□□□□□ -0.38	4e-7	■□□□□ 9.7
DDR1-238	ENST00000446312	MAGEA3	P43357	314 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	ENTPD1	P49961	510 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	LIMK2	P53671	638 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	TSPY1	Q01534	308 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	GHRHR	Q02643	423 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	NSUN2	Q08J23	767 aa	Known RBP eCLIP	12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	PATL1	Q86TB9	770 aa	Known RBP	12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	SPPL2C	Q8IUH8	684 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	HERC6	Q8IVU3	1022 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	MFSD6L	Q8IWD5	586 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	SLC43A3	Q8NBI5	491 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	TXNDC5	Q8NBS9	432 aa	Known RBP	12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	TSPAN14	Q8NG11	270 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	ZBED3	Q96IU2	234 aa	Predicted RBP	12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	CPNE1	Q99829	537 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	EBF1	Q9UH73	591 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	CDC14A	Q9UNH5	594 aa		12.67	□□□□□ -0.38
DDR1-238	ENST00000446312	ZNF638	Q14966	1978 aa	Known RBP	12.66	□□□□□ -0.38
DDR1-238	ENST00000446312		H3BRB1	525 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	B4GAT1	O43505	415 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	GJB3	O75712	270 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	SIX3	O95343	332 aa	Predicted RBP	12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	CTSH	P09668	335 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	IDO1	P14902	403 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	APLP1	P51693	650 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	NDST2	P52849	883 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	BST2	Q10589	180 aa	Known RBP	12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	OTUD3	Q5T2D3	398 aa	Predicted RBP	12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	ZBTB49	Q6ZSB9	765 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	DDIAS	Q8IXT1	998 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	HEXDC	Q8WVB3	486 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	CANT1	Q8WVQ1	401 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	LRRC39	Q96DD0	335 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	KLHL5	Q96PQ7	755 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	KCNA7	Q96RP8	456 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	RTKN	Q9BST9	563 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	TKTL2	Q9H0I9	626 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	C1orf21	Q9H246	121 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	CYP3A43	Q9HB55	503 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	TMEM30A	Q9NV96	361 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	FZD10	Q9ULW2	581 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	PRORSD1P	A6NEY8	169 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	MDM4	O15151	490 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	PCNA	P12004	261 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	C1QTNF8	P60827	252 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	ATP1A4	Q13733	1029 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	MGAT5B	Q3V5L5	792 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	FBXO47	Q5MNV8	452 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	DNER	Q8NFT8	737 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	DNAJB3	Q8WWF6	145 aa		12.66	□□□□□ -0.38
DDR1-238	ENST00000446312	NAA50	Q9GZZ1	169 aa	Known RBP	12.66	□□□□□ -0.38

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