RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 TNNT1P13805 278 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 MUTP22033 750 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 NFKBIAP25963 317 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 DPP6P42658 865 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 ABCG1P45844 678 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 RPS6KA3P51812 740 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 OAZ1P54368 228 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 CDH15P55291 814 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 PKP1Q13835 747 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 KLF9Q13886 244 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 SCARB2Q14108 478 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 TMEM266Q2M3C6 531 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 PLK5Q496M5 336 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 ISM2Q6H9L7 571 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 CYP20A1Q6UW02 462 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 LRIG3Q6UXM1 1119 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 GALNTL5Q7Z4T8 443 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 KLBQ86Z14 1044 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 BRSK2Q8IWQ3 736 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 DDIASQ8IXT1 998 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 VPS52Q8N1B4 723 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 TMEM217Q8N7C4 229 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 ZNF366Q8N895 744 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 C16orf52Q8NHV5 167 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 SCFD2Q8WU76 684 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 SH3KBP1Q96B97 665 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 RNFT2Q96EX2 444 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 TRIM31Q9BZY9 425 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 TTYH1Q9H313 450 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 ARGLU1Q9NWB6 273 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 ALKBH4Q9NXW9 302 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 KCND2Q9NZV8 630 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 HDAC6Q9UBN7 1215 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 UPB1Q9UBR1 384 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 IPO11Q9UI26 975 aaKnown RBP4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 CORO1CQ9ULV4 474 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 TNFSF13BQ9Y275 285 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 CECR2Q9BXF3 1484 aa4.72□□□□□ -1.65
HMGB1P48-201ENST00000446155 TCRBV7S3A2A0A539 114 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 GAGE10A6NGK3 116 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 FAM90A7PA6NKC0 464 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 FAM90A22PA8MWA6 464 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 FAM90A12PA8MX19 464 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 FAM90A23PA8MXZ1 464 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 ZNF814B7Z6K7 855 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 TGFB1I1O43294 461 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 UGDHO60701 494 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 LCKP06239 509 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 ARL1P40616 181 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 EIF2DP41214 584 aaKnown RBP4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 MTNR1AP48039 350 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 ZNF766Q5HY98 468 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 SLC10A5Q5PT55 438 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 NUGGCQ68CJ6 796 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 C11orf87Q6NUJ2 197 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 AADACL2Q6P093 401 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 ZNF793Q6ZN11 406 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 FAM47EQ6ZV65 393 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 ADGRG6Q86SQ4 1221 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 CCDC105Q8IYK2 499 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 WDTC1Q8N5D0 677 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 KCTD6Q8NC69 237 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 RFWD2Q8NHY2 731 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 JAKMIP2Q96AA8 810 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 ZFYVE19Q96K21 471 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 CD180Q99467 661 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 WDR83Q9BRX9 315 aaKnown RBP4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 PCDHB16Q9NRJ7 776 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 ATP8A2Q9NTI2 1148 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 TUBA8Q9NY65 449 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 MORF4L1Q9UBU8 362 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 SLC25A13Q9UJS0 675 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 UTS2RQ9UKP6 389 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 LAMP3Q9UQV4 416 aa4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 SOS1Q07889 1333 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P48-201ENST00000446155 GOLGA6L10A0A0M3HER8 536 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 WDR91A4D1P6 747 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 FOXO6A8MYZ6 492 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 UBE2CO00762 179 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 SH2B2O14492 632 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 CLGNO14967 610 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 SYN3O14994 580 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 ATG13O75143 517 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 TBCAO75347 108 aaKnown RBP4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 NFATC1O95644 943 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 FGF2P09038 288 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 GSTM2P28161 218 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 GCH1P30793 250 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 GJC1P36383 396 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 PPARGP37231 505 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 RPL7AP62424 266 aaKnown RBP4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 GOLGA8FQ08AF8 430 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 MTX1Q13505 466 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 PRPF4BQ13523 1007 aaKnown RBP4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 BYSLQ13895 437 aaKnown RBP4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 RUNDC3AQ59EK9 446 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 PIK3CD-AS1Q5SR53 167 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 TTC39AQ5SRH9 613 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 GJB7Q6PEY0 223 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms