RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 AP1B1Q10567 949 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 SFSWAPQ12872 951 aaKnown RBP8.88□□□□□ -0.99
FXR1-203ENST00000445140 ZNF234Q14588 700 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 ZNF235Q14590 738 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 NAA30Q147X3 362 aaPredicted RBP8.88□□□□□ -0.99
FXR1-203ENST00000445140 DNAJC21Q5F1R6 531 aaKnown RBP8.88□□□□□ -0.99
FXR1-203ENST00000445140 HIBCHQ6NVY1 386 aaPredicted RBP8.88□□□□□ -0.99
FXR1-203ENST00000445140 C8orf74Q6P047 294 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 TXNDC11Q6PKC3 985 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 TPRG1Q6ZUI0 275 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 DSG4Q86SJ6 1040 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 LINC00523Q86TU6 105 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.88□□□□□ -0.99
FXR1-203ENST00000445140 CCDC105Q8IYK2 499 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 PTCD2Q8WV60 388 aaKnown RBP8.88□□□□□ -0.99
FXR1-203ENST00000445140 SNF8Q96H20 258 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 MYCBPQ99417 103 aaPredicted RBP8.88□□□□□ -0.99
FXR1-203ENST00000445140 TMEM121Q9BTD3 319 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 CARD6Q9BX69 1037 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 LRRC40Q9H9A6 602 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 MRM3Q9HC36 420 aaKnown RBP8.88□□□□□ -0.99
FXR1-203ENST00000445140 HEBP1Q9NRV9 189 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 SAE1Q9UBE0 346 aaPredicted RBP8.88□□□□□ -0.99
FXR1-203ENST00000445140 CCDC163A0A0D9SF12 145 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 KRBA1A5PL33 1030 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 E7ESA3 106 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 CBX4O00257 560 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 TRAFD1O14545 582 aaPredicted RBP8.88□□□□□ -0.99
FXR1-203ENST00000445140 RAD51CO43502 376 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 ALADP13716 330 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 HLA-DPA1P20036 260 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 ACTN2P35609 894 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 PRPSAP1Q14558 356 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 SPDYCQ5MJ68 293 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 C9orf64Q5T6V5 341 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 RNASEH2BQ5TBB1 312 aaKnown RBP8.88□□□□□ -0.99
FXR1-203ENST00000445140 ZNF449Q6P9G9 518 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 SYT13Q7L8C5 426 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 ZC3H18Q86VM9 953 aaKnown RBP8.88□□□□□ -0.99
FXR1-203ENST00000445140 PPIL6Q8IXY8 311 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 NAT8LQ8N9F0 302 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 OR2A12Q8NGT7 310 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 SCG3Q8WXD2 468 aaKnown RBP8.88□□□□□ -0.99
FXR1-203ENST00000445140 LRRC39Q96DD0 335 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 KRT12Q99456 494 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 HDAC8Q9BY41 377 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 RBM22Q9NW64 420 aaKnown RBP eCLIP8.88□□□□□ -0.991e-6■■■■□ 24.6
FXR1-203ENST00000445140 PLK2Q9NYY3 685 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 SMARCAL1Q9NZC9 954 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 KLHL42Q9P2K6 505 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 PLA2G4CQ9UP65 541 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 LAMA3Q16787 3333 aa8.88□□□□□ -0.99
FXR1-203ENST00000445140 SGK1O00141 431 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 TP73O15350 636 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 MAP3K13O43283 966 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 AP1G1O43747 822 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 SEC31AO94979 1220 aaKnown RBP8.87□□□□□ -0.99
FXR1-203ENST00000445140 ADH1BP00325 375 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 PRNPP04156 253 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 RAD51Q06609 339 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 C2orf54Q08AI8 447 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 ILF2Q12905 390 aaKnown RBP8.87□□□□□ -0.99
FXR1-203ENST00000445140 LAMB3Q13751 1172 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 TSNAXIP1Q2TAA8 658 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 MYLK3Q32MK0 819 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 BRAT1Q6PJG6 821 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 ARHGEF18Q6ZSZ5 1173 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 USP30Q70CQ3 517 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 PRPF39Q86UA1 669 aaKnown RBP8.87□□□□□ -0.99
FXR1-203ENST00000445140 FAM71DQ8N9W8 422 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 CCNYQ8ND76 341 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 PJA1Q8NG27 643 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 PTPRN2Q92932 1015 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 ART4Q93070 314 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 RAB7BQ96AH8 199 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 MCCC1Q96RQ3 725 aaPredicted RBP8.87□□□□□ -0.99
FXR1-203ENST00000445140 TDRD1Q9BXT4 1180 aaKnown RBP8.87□□□□□ -0.99
FXR1-203ENST00000445140 PCED1AQ9H1Q7 454 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 XAB2Q9HCS7 855 aaKnown RBP8.87□□□□□ -0.99
FXR1-203ENST00000445140 CASS4Q9NQ75 786 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 FAM153AQ9UHL3 310 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 RAB21Q9UL25 225 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 STON1Q9Y6Q2 735 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 REV3LO60673 3130 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 MYLKQ15746 1914 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 MUSKO15146 869 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 ZBTB24O43167 697 aaPredicted RBP8.87□□□□□ -0.99
FXR1-203ENST00000445140 DCXO43602 365 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 EGFP01133 1207 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 JCHAINP01591 159 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 GLDCP23378 1020 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 NFKBIAP25963 317 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 ITGB7P26010 798 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 GRIA4P48058 902 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 CLCN5P51795 746 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 RHOAP61586 193 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 KDSRQ06136 332 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 AGERQ15109 404 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 DLG2Q15700 870 aa8.87□□□□□ -0.99
FXR1-203ENST00000445140 NAPEPLDQ6IQ20 393 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms