RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 ITIH2P19823 946 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 STAT1P42224 750 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 PFN3P60673 137 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 EIF2B5Q13144 721 aaKnown RBP15.67■□□□□ 0.1
SEC13-213ENST00000445064 CDKN3Q16667 212 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 DEFB133Q30KQ1 61 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 TBC1D25Q3MII6 688 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 LRRC73Q5JTD7 316 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 FKBP15Q5T1M5 1219 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 CDKAL1Q5VV42 579 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 WDR59Q6PJI9 974 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 GDPD4Q6W3E5 623 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 TRIM72Q6ZMU5 477 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 SLFN11Q7Z7L1 901 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 PARGQ86W56 976 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 ZNF354CQ86Y25 554 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 IFI44Q8TCB0 444 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 LMX1AQ8TE12 382 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 FCRL3Q96P31 734 aaPredicted RBP15.67■□□□□ 0.1
SEC13-213ENST00000445064 UBL7Q96S82 380 aaPredicted RBP15.67■□□□□ 0.1
SEC13-213ENST00000445064 SELENOOQ9BVL4 669 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 KLC2Q9H0B6 622 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 FANCLQ9NW38 375 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 ADAM22Q9P0K1 906 aa15.67■□□□□ 0.1
SEC13-213ENST00000445064 SHROOM3Q8TF72 1996 aa15.66■□□□□ 0.1
SEC13-213ENST00000445064 CPED1A4D0V7 1026 aa15.66■□□□□ 0.1
SEC13-213ENST00000445064 AQP9O43315 295 aa15.66■□□□□ 0.1
SEC13-213ENST00000445064 MMP20O60882 483 aa15.66■□□□□ 0.1
SEC13-213ENST00000445064 USP12O75317 370 aa15.66■□□□□ 0.1
SEC13-213ENST00000445064 CSO75390 466 aaKnown RBP15.66■□□□□ 0.1
SEC13-213ENST00000445064 GP1BAP07359 652 aa15.66■□□□□ 0.1
SEC13-213ENST00000445064 TPM2P07951 284 aa15.66■□□□□ 0.1
SEC13-213ENST00000445064 GPD1P21695 349 aa15.66■□□□□ 0.1
SEC13-213ENST00000445064 NSFP46459 744 aaKnown RBP15.66■□□□□ 0.1
SEC13-213ENST00000445064 ZCCHC8Q6NZY4 707 aaKnown RBP15.66■□□□□ 0.1
SEC13-213ENST00000445064 SCYL2Q6P3W7 929 aa15.66■□□□□ 0.1
SEC13-213ENST00000445064 ZSCAN30Q86W11 494 aa15.66■□□□□ 0.1
SEC13-213ENST00000445064 MAPK15Q8TD08 544 aa15.66■□□□□ 0.1
SEC13-213ENST00000445064 ASB12Q8WXK4 309 aa15.66■□□□□ 0.1
SEC13-213ENST00000445064 CENPTQ96BT3 561 aa15.66■□□□□ 0.1
SEC13-213ENST00000445064 NAF1Q96HR8 494 aaKnown RBP15.66■□□□□ 0.1
SEC13-213ENST00000445064 PCMTD1Q96MG8 357 aaPredicted RBP15.66■□□□□ 0.1
SEC13-213ENST00000445064 DEPDC7Q96QD5 511 aa15.66■□□□□ 0.1
SEC13-213ENST00000445064 OSBPL1AQ9BXW6 950 aa15.66■□□□□ 0.1
SEC13-213ENST00000445064 TCEAL2Q9H3H9 227 aaPredicted RBP15.66■□□□□ 0.1
SEC13-213ENST00000445064 NOL6Q9H6R4 1146 aaKnown RBP15.66■□□□□ 0.1
SEC13-213ENST00000445064 USP29Q9HBJ7 922 aa15.66■□□□□ 0.1
SEC13-213ENST00000445064 EVA1BQ9NVM1 165 aa15.66■□□□□ 0.1
SEC13-213ENST00000445064 SIK3Q9Y2K2 1263 aa15.66■□□□□ 0.1
SEC13-213ENST00000445064 CSNK1G3Q9Y6M4 447 aa15.66■□□□□ 0.1
SEC13-213ENST00000445064 AREL1O15033 823 aa15.65■□□□□ 0.1
SEC13-213ENST00000445064 TMCC1O94876 653 aa15.65■□□□□ 0.1
SEC13-213ENST00000445064 TGM2P21980 687 aa15.65■□□□□ 0.1
SEC13-213ENST00000445064 EPHB2P29323 1055 aa15.65■□□□□ 0.1
SEC13-213ENST00000445064 GABREP78334 506 aa15.65■□□□□ 0.1
SEC13-213ENST00000445064 C1orf61Q13536 156 aa15.65■□□□□ 0.1
SEC13-213ENST00000445064 SYCP1Q15431 976 aa15.65■□□□□ 0.1
SEC13-213ENST00000445064 CLEC16AQ2KHT3 1053 aa15.65■□□□□ 0.1
SEC13-213ENST00000445064 GUSBP11Q6P575 273 aa15.65■□□□□ 0.1
SEC13-213ENST00000445064 VPS36Q86VN1 386 aa15.65■□□□□ 0.1
SEC13-213ENST00000445064 SPACA3Q8IXA5 215 aa15.65■□□□□ 0.1
SEC13-213ENST00000445064 RBFAQ8N0V3 343 aa15.65■□□□□ 0.1
SEC13-213ENST00000445064 NTAN1Q96AB6 310 aa15.65■□□□□ 0.1
SEC13-213ENST00000445064 IL12RB2Q99665 862 aa15.65■□□□□ 0.1
SEC13-213ENST00000445064 TTYH3Q9C0H2 523 aa15.65■□□□□ 0.1
SEC13-213ENST00000445064 MBNL1Q9NR56 388 aaKnown RBP15.65■□□□□ 0.1
SEC13-213ENST00000445064 LMBRD1Q9NUN5 540 aa15.65■□□□□ 0.1
SEC13-213ENST00000445064 SALL4Q9UJQ4 1053 aa15.65■□□□□ 0.1
SEC13-213ENST00000445064 PNMA8BQ9ULN7 279 aaPredicted RBP15.65■□□□□ 0.1
SEC13-213ENST00000445064 IGSF10Q6WRI0 2623 aa15.65■□□□□ 0.1
SEC13-213ENST00000445064 CHD5Q8TDI0 1954 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 ZSCAN5CA6NGD5 496 aaPredicted RBP15.64■□□□□ 0.09
SEC13-213ENST00000445064 SIGLEC16A6NMB1 481 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 CCP110O43303 1012 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 CREB3O43889 395 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 GCATO75600 419 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 TM7SF2O76062 418 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 CALB1P05937 261 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 TIMP2P16035 220 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 IGFALSP35858 605 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 THOP1P52888 689 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 COPB1P53618 953 aaKnown RBP15.64■□□□□ 0.09
SEC13-213ENST00000445064 ADKP55263 362 aaKnown RBP15.64■□□□□ 0.09
SEC13-213ENST00000445064 TLE3Q04726 772 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 RAD51Q06609 339 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 PTK2BQ14289 1009 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 CRTC1Q6UUV9 634 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 EFL1Q7Z2Z2 1120 aaKnown RBP15.64■□□□□ 0.09
SEC13-213ENST00000445064 GPR155Q7Z3F1 870 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 PHF13Q86YI8 300 aaPredicted RBP15.64■□□□□ 0.09
SEC13-213ENST00000445064 RTL3Q8N8U3 475 aaKnown RBP15.64■□□□□ 0.09
SEC13-213ENST00000445064 DENND6BQ8NEG7 585 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 BTN2A2Q8WVV5 523 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 SLC39A7Q92504 469 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 ARHGEF26Q96DR7 871 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 GDAP1L1Q96MZ0 367 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 ZNF578Q96N58 590 aaPredicted RBP15.64■□□□□ 0.09
SEC13-213ENST00000445064 LGMNQ99538 433 aa15.64■□□□□ 0.09
SEC13-213ENST00000445064 WRAP53Q9BUR4 548 aaKnown RBP15.64■□□□□ 0.09
SEC13-213ENST00000445064 SEPT11Q9NVA2 429 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms