RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 PCDHB9Q9Y5E1 797 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 RGPD1P0DJD0 1748 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 RNASEH1O60930 286 aaKnown RBP22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 TMEM63AO94886 807 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 PCDH8O95206 1070 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 USP41Q3LFD5 358 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 STK32CQ86UX6 486 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 MCRS1Q96EZ8 462 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 MRPL17Q9NRX2 175 aaKnown RBP22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 NEK3P51956 506 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 NRLP54845 237 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 CNTN1Q12860 1018 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 CSTF3Q12996 717 aaKnown RBP22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 PWP1Q13610 501 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 ADRM1Q16186 407 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 PPM1LQ5SGD2 360 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 ZNF567Q8N184 647 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 BDH2Q9BUT1 245 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 LRMDAQ9H2I8 198 aa22.62■■□□□ 1.21
CTDSPL-206ENST00000443503 CLOCKO15516 846 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 POU1F1P28069 291 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 ERAP2Q6P179 960 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 APLFQ8IW19 511 aaPredicted RBP22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 PHACTR4Q8IZ21 702 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 RABGEF1Q9UJ41 708 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 AP4S1Q9Y587 144 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 C5orf60A6NFR6 353 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 OR6C75A6NL08 312 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 TYMPP19971 482 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 IL1R2P27930 398 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 SPPL2BQ8TCT7 592 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 OSBPL7Q9BZF2 842 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 ZDHHC6Q9H6R6 413 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 WDR55Q9H6Y2 383 aaPredicted RBP22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 TNPO3Q9Y5L0 923 aaKnown RBP22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 PHLPP1O60346 1717 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 MOXD2PA6NHM9 499 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 KDM1AO60341 852 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 TBL1XO60907 577 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 VPS4BO75351 444 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 CRHR1P34998 444 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 TTPAP49638 278 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 INTS6LQ5JSJ4 861 aaKnown RBP22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 BBS7Q8IWZ6 715 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 CYP4X1Q8N118 509 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 GRIN3AQ8TCU5 1115 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 RCN3Q96D15 328 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 TXNRD2Q9NNW7 524 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 ACSS2Q9NR19 701 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 PARNO95453 639 aaKnown RBP22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 DGKAP23743 735 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 S100A5P33763 92 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 POLR2LP62875 67 aaKnown RBP22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 ARHGAP1Q07960 439 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 IRGCQ6NXR0 463 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 SPATA22Q8NHS9 363 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 OSCP1Q8WVF1 389 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 SERAC1Q96JX3 654 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 TBCDQ9BTW9 1192 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 MIEF1Q9NQG6 463 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 GMIPQ9P107 970 aa22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 AGO1Q9UL18 857 aaKnown RBP22.61■■□□□ 1.21
CTDSPL-206ENST00000443503 YJEFN3A6XGL0 299 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 FGF1P05230 155 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 ABCB1P08183 1280 aaPredicted RBP22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 FAM182AQ5T1J6 154 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 VSTM1Q6UX27 236 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 SLC24A5Q71RS6 500 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 TRIM48Q8IWZ4 208 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 B4GALNT2Q8NHY0 566 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 SLC7A5P2Q9GIP4 190 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 BTRCQ9Y297 605 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 ZBTB14O43829 449 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 ONECUT3O60422 494 aaPredicted RBP22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 SNRPB2P08579 225 aaKnown RBP22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 LPOP22079 712 aaPredicted RBP22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 PSME3P61289 254 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 NOGQ13253 232 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 SH3D19Q5HYK7 790 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 CDYL2Q8N8U2 506 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 SLC35B2Q8TB61 432 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 YIPF2Q9BWQ6 316 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 VPS45Q9NRW7 570 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 CHKBQ9Y259 395 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 SNX10Q9Y5X0 201 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 ACOX1Q15067 660 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 AFTPHQ6ULP2 937 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 USP45Q70EL2 814 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 NET1Q7Z628 596 aaPredicted RBP22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 DTLQ9NZJ0 730 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 NR2E3Q9Y5X4 410 aa22.6■■□□□ 1.21
CTDSPL-206ENST00000443503 AP2A1O95782 977 aa22.59■■□□□ 1.21
CTDSPL-206ENST00000443503 NRF1Q16656 503 aa22.59■■□□□ 1.21
CTDSPL-206ENST00000443503 C15orf38-AP3S2A0A0A6YYH1 394 aa22.59■■□□□ 1.21
CTDSPL-206ENST00000443503 ZBTB48P10074 688 aaPredicted RBP22.59■■□□□ 1.21
CTDSPL-206ENST00000443503 HGFP14210 728 aa22.59■■□□□ 1.21
CTDSPL-206ENST00000443503 DAOAP59103 153 aa22.59■■□□□ 1.21
CTDSPL-206ENST00000443503 ARPINQ7Z6K5 226 aa22.59■■□□□ 1.21
CTDSPL-206ENST00000443503 FAM124BQ9H5Z6 455 aaPredicted RBP22.59■■□□□ 1.21
CTDSPL-206ENST00000443503 AGO3Q9H9G7 860 aaKnown RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms