RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.64□□□□□ -1.51
PTPRC-209ENST00000442510 TEX13CA0A0J9YWL9 993 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 PITPNM1O00562 1244 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 SUPT7LO94864 414 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 ATG7O95352 703 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 SLC2A3P11169 496 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 RALBP11234 206 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 FASP25445 335 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 GRK3P35626 688 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 PTGDRQ13258 359 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 ZNF177Q13360 481 aaPredicted RBP5.64□□□□□ -1.51
PTPRC-209ENST00000442510 MKRN4PQ13434 485 aaPredicted RBP5.64□□□□□ -1.51
PTPRC-209ENST00000442510 RAP1GAP2Q684P5 730 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 RFWD3Q6PCD5 774 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 DEF8Q6ZN54 512 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 UBE2R2Q712K3 238 aaPredicted RBP5.64□□□□□ -1.51
PTPRC-209ENST00000442510 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.64□□□□□ -1.51
PTPRC-209ENST00000442510 DCP1BQ8IZD4 617 aaKnown RBP5.64□□□□□ -1.51
PTPRC-209ENST00000442510 TERB2Q8NHR7 220 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 DNAJB8Q8NHS0 232 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 POF1BQ8WVV4 589 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 ST8SIA4Q92187 359 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 KAT2AQ92830 837 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 NELL1Q92832 810 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 TCEAL4Q96EI5 215 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 AGAP2Q99490 1192 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 DPP3Q9NY33 737 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 CNOT8Q9UFF9 292 aaKnown RBP5.64□□□□□ -1.51
PTPRC-209ENST00000442510 CPQQ9Y646 472 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 A0A075B6Q4 140 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 ADAM12O43184 909 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 ALDH1A2O94788 518 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 SERPINA3P01011 423 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 IFNA10P01566 189 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 IFNA4P05014 189 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 CYP3A4P08684 503 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 IGFBP1P08833 259 aaPredicted RBP5.64□□□□□ -1.51
PTPRC-209ENST00000442510 ZNF182P17025 639 aaPredicted RBP5.64□□□□□ -1.51
PTPRC-209ENST00000442510 IMPDH1P20839 514 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 ME2P23368 584 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 ATP5F1P24539 256 aaPredicted RBP5.64□□□□□ -1.51
PTPRC-209ENST00000442510 CD6P30203 668 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 PRKCIP41743 596 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 NPY2RP49146 381 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 GABREP78334 506 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 BEX3Q00994 111 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 ZNHIT3Q15649 155 aaPredicted RBP5.64□□□□□ -1.51
PTPRC-209ENST00000442510 RFX4Q33E94 735 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 LRIF1Q5T3J3 769 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 TMEM26Q6ZUK4 368 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 CLNKQ7Z7G1 428 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 ARFGAP1Q8N6T3 406 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 BBS1Q8NFJ9 593 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 RDM1Q8NG50 284 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 RNF139Q8WU17 664 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 REPS1Q96D71 796 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 OTUB1Q96FW1 271 aaPredicted RBP5.64□□□□□ -1.51
PTPRC-209ENST00000442510 FOPNLQ96NB1 174 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 MIPEPQ99797 713 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 RHBGQ9H310 441 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 VRTNQ9H8Y1 702 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 NCOA5Q9HCD5 579 aaKnown RBP5.64□□□□□ -1.51
PTPRC-209ENST00000442510 INTS10Q9NVR2 710 aaKnown RBP5.64□□□□□ -1.51
PTPRC-209ENST00000442510 PCDHB8Q9UN66 801 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 KIF21AQ7Z4S6 1674 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 AOX1Q06278 1338 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 A0A1W2PQC6 194 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 KRBOX1C9JBD0 128 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 hCG_2039718K7EN88 272 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 GYPCP04921 128 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 ARL3P36405 182 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 SLC7A2P52569 658 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 SLC3A1Q07837 685 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 SPOUT1Q5T280 376 aaKnown RBP5.64□□□□□ -1.51
PTPRC-209ENST00000442510 SLFN13Q68D06 897 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 ADAMTSL2Q86TH1 951 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 LINC00518Q8N0U6 118 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 PDIK1LQ8N165 341 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 C8orf37Q96NL8 207 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 DHX33Q9H6R0 707 aaKnown RBP5.64□□□□□ -1.51
PTPRC-209ENST00000442510 ADAMTS1Q9UHI8 967 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 PEX16Q9Y5Y5 336 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 CAMSAP2Q08AD1 1489 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 PDS5BQ9NTI5 1447 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 WNT7AO00755 349 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 SORBS3O60504 671 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 TSPAN7P41732 249 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 SLC26A2P50443 739 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 GRIN2CQ14957 1233 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 SAPCD1Q5SSQ6 148 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 SHEQ5VZ18 495 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 USPL1Q5W0Q7 1092 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 TMEM132EQ6IEE7 984 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 ACAD10Q6JQN1 1059 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 GGT6Q6P531 493 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 JAMLQ86YT9 394 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 ZBTB44Q8NCP5 570 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 OR6S1Q8NH40 331 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 HUS1BQ8NHY5 278 aa5.64□□□□□ -1.51
PTPRC-209ENST00000442510 AP3S1Q92572 193 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms