RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 TUBA8Q9NY65 449 aaPredicted RBP20.51■□□□□ 0.87
SHOX2-203ENST00000441443 UTP6Q9NYH9 597 aaKnown RBP20.51■□□□□ 0.87
SHOX2-203ENST00000441443 SIP14410 1827 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 PARP14Q460N5 1801 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 ZNF701M0R085 212 aaPredicted RBP20.51■□□□□ 0.87
SHOX2-203ENST00000441443 TMED10P49755 219 aaKnown RBP20.51■□□□□ 0.87
SHOX2-203ENST00000441443 SPIDRQ14159 915 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 KCTD2Q14681 263 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 NR1D2Q14995 579 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 ANKRD26P1Q6NSI1 321 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 SLC15A4Q8N697 577 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 HPDLQ96IR7 371 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 TCF12Q99081 682 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 VANGL2Q9ULK5 521 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 GINS2Q9Y248 185 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 DNAH12Q6ZR08 3092 aa20.51■□□□□ 0.87
SHOX2-203ENST00000441443 TRIM64CA6NLI5 447 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 CABYRO75952 493 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 TPH1P17752 444 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 PPP1R3AQ16821 1122 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 CXorf38Q8TB03 319 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 PPP1R13LQ8WUF5 828 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 UHRF1Q96T88 793 aaPredicted RBP20.5■□□□□ 0.87
SHOX2-203ENST00000441443 LPIN3Q9BQK8 851 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 MINDY3Q9H8M7 445 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 EIF2B3Q9NR50 452 aaKnown RBP20.5■□□□□ 0.87
SHOX2-203ENST00000441443 IGKV6D-21A0A0A0MT36 114 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 MT-CO1P00395 513 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 TXNP10599 105 aaKnown RBP20.5■□□□□ 0.87
SHOX2-203ENST00000441443 EIF2B2P49770 351 aaKnown RBP20.5■□□□□ 0.87
SHOX2-203ENST00000441443 ITGADQ13349 1161 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 FASTKQ14296 549 aaKnown RBP20.5■□□□□ 0.87
SHOX2-203ENST00000441443 USP10Q14694 798 aaKnown RBP20.5■□□□□ 0.87
SHOX2-203ENST00000441443 NOL9Q5SY16 702 aaKnown RBP20.5■□□□□ 0.87
SHOX2-203ENST00000441443 KCNMB4Q86W47 210 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 FAM131BQ86XD5 332 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 DHFR2Q86XF0 187 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 EPHX4Q8IUS5 362 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 ZC3H7AQ8IWR0 971 aaKnown RBP20.5■□□□□ 0.87
SHOX2-203ENST00000441443 ANKFN1Q8N957 763 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 OR9I1Q8NGQ6 314 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 TSNARE1Q96NA8 513 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 C1QTNF1Q9BXJ1 281 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 CHRAC1Q9NRG0 131 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 XPR1Q9UBH6 696 aa20.5■□□□□ 0.87
SHOX2-203ENST00000441443 RNF103-CHMP3A0A140T963 221 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 RBM47A0AV96 593 aaKnown RBP20.49■□□□□ 0.87
SHOX2-203ENST00000441443 SLCO1B7G3V0H7 640 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 DDHD2O94830 711 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 HSPA1AP0DMV8 641 aaKnown RBP20.49■□□□□ 0.87
SHOX2-203ENST00000441443 HSPA1BP0DMV9 641 aaKnown RBP20.49■□□□□ 0.87
SHOX2-203ENST00000441443 ATP6V1B2P21281 511 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 SLC7A2P52569 658 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 NME5P56597 212 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 MERTKQ12866 999 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 STX5Q13190 355 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 EFCAB12Q6NXP0 572 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 GPR20Q99678 358 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 MCM3APO60318 1980 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 DCKP27707 260 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 KCTD8Q6ZWB6 473 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 RPS27LQ71UM5 84 aaKnown RBP20.49■□□□□ 0.87
SHOX2-203ENST00000441443 SIX6OS1Q8N1H7 587 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 ADAMTS16Q8TE57 1224 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 HEPHQ9BQS7 1158 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 BRD8Q9H0E9 1235 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 CDT1Q9H211 546 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 TSPYL2Q9H2G4 693 aaPredicted RBP20.49■□□□□ 0.87
SHOX2-203ENST00000441443 PRDM12Q9H4Q4 367 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 SOX17Q9H6I2 414 aaPredicted RBP20.49■□□□□ 0.87
SHOX2-203ENST00000441443 CD300AQ9UGN4 299 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 MID2Q9UJV3 735 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 LTBP3Q9NS15 1303 aa20.49■□□□□ 0.87
SHOX2-203ENST00000441443 SYNJ2BP-COX16A0A087WUM0 186 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 TIMM44O43615 452 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 MYF6P23409 242 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 IER5Q5VY09 327 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 ACOT1Q86TX2 421 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.48■□□□□ 0.87
SHOX2-203ENST00000441443 TNIP2Q8NFZ5 429 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 TOP1MTQ969P6 601 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 IL1RL2Q9HB29 575 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 COX16Q9P0S2 106 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 FADS3Q9Y5Q0 445 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 C1orf232A0A0U1RR37 186 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 E2F6O75461 281 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 BMP2P12643 396 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 ZNF24P17028 368 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 ARL4AP40617 200 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 PSMD8P48556 350 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 TRAP1Q12931 704 aaKnown RBP20.48■□□□□ 0.87
SHOX2-203ENST00000441443 TBCELQ5QJ74 424 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 ERMP1Q7Z2K6 904 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 TMEM135Q86UB9 458 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 CHPT1Q8WUD6 406 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 MRPL40Q9NQ50 206 aaKnown RBP20.48■□□□□ 0.87
SHOX2-203ENST00000441443 BFARQ9NZS9 450 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 PTBP2Q9UKA9 531 aaKnown RBP20.48■□□□□ 0.87
SHOX2-203ENST00000441443 BPTFQ12830 3046 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 EVPLQ92817 2033 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms