RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 EEF1B2P24534 225 aaKnown RBP16.98■□□□□ 0.31
PMS1-213ENST00000441310 GNL1P36915 607 aaPredicted RBP16.98■□□□□ 0.31
PMS1-213ENST00000441310 CDH6P55285 790 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 PRAMEF19Q5SWL8 479 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 TAPT1Q6NXT6 567 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 FAM117BQ6P1L5 589 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 PLD6Q8N2A8 252 aaKnown RBP16.98■□□□□ 0.31
PMS1-213ENST00000441310 PCDHGA3Q9Y5H0 932 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 PCDHA11Q9Y5I1 949 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 WDR27A2RRH5 827 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 ASB14A6NK59 587 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 LACTBL1A8MY62 500 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 NME5P56597 212 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 TNK2Q07912 1038 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 PPP2R2DQ66LE6 453 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 PPP4R4Q6NUP7 873 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 LAYNQ6UX15 382 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 PIWIL3Q7Z3Z3 882 aaKnown RBP16.97■□□□□ 0.31
PMS1-213ENST00000441310 SIX5Q8N196 739 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 CLIP4Q8N3C7 705 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 CNDP1Q96KN2 507 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 FAM49AQ9H0Q0 323 aaPredicted RBP16.97■□□□□ 0.31
PMS1-213ENST00000441310 FZD8Q9H461 694 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 SOX17Q9H6I2 414 aaPredicted RBP16.97■□□□□ 0.31
PMS1-213ENST00000441310 PCDHGC3Q9UN70 934 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 AURKCQ9UQB9 309 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 CLOCKO15516 846 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 GUCY1B2O75343 617 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 ITGB3P05106 788 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 MYF6P23409 242 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 MIPP30301 263 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 NR4A2P43354 598 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 NUMBP49757 651 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 MERTKQ12866 999 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 LDLRAD1Q5T700 205 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 BSPRYQ5W0U4 402 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 FRA10AC1Q70Z53 315 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 NIPA2Q8N8Q9 360 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 ACMSDQ8TDX5 336 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 EFHD1Q9BUP0 239 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 C2orf40Q9H1Z8 148 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 DKK3Q9UBP4 350 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 HMGXB4Q9UGU5 601 aa16.97■□□□□ 0.31
PMS1-213ENST00000441310 JRKO75564 520 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 JUNP05412 331 aaKnown RBP16.96■□□□□ 0.31
PMS1-213ENST00000441310 STAG3L1P0CL83 205 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 PLCL1Q15111 1095 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 SEL1L3Q68CR1 1132 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 LRRC8EQ6NSJ5 796 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 HACE1Q8IYU2 909 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 BRI3BPQ8WY22 251 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 POLE4Q9NR33 117 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.96■□□□□ 0.31
PMS1-213ENST00000441310 GMPR2Q9P2T1 348 aaKnown RBP16.96■□□□□ 0.31
PMS1-213ENST00000441310 KLQ9UEF7 1012 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 TCAF2A6NFQ2 919 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 TOR1BO14657 336 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 ITGBL1O95965 494 aaPredicted RBP16.96■□□□□ 0.31
PMS1-213ENST00000441310 LTFP02788 710 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 SLC7A1P30825 629 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 MAPK11Q15759 364 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 INAVAQ3KP66 663 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 JADE1Q6IE81 842 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 DENND1BQ6P3S1 775 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 WDTC1Q8N5D0 677 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 ABHD11Q8NFV4 315 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 CANT1Q8WVQ1 401 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 ILKAPQ9H0C8 392 aaPredicted RBP16.96■□□□□ 0.31
PMS1-213ENST00000441310 SDCBP2Q9H190 292 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 XYLT2Q9H1B5 865 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 FANCEQ9HB96 536 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 PTPRHQ9HD43 1115 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 DLGAP1O14490 977 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 CNTFP26441 200 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 POLR2BP30876 1174 aaKnown RBP16.96■□□□□ 0.31
PMS1-213ENST00000441310 POLR2IP36954 125 aaKnown RBP16.96■□□□□ 0.31
PMS1-213ENST00000441310 ABCG1P45844 678 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 GLT1D1Q96MS3 346 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 TCF12Q99081 682 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 PSD2Q9BQI7 771 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 CXCL16Q9H2A7 254 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.96■□□□□ 0.31
PMS1-213ENST00000441310 SIX4Q9UIU6 781 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 AP4E1Q9UPM8 1137 aa16.96■□□□□ 0.31
PMS1-213ENST00000441310 GLTPD2A6NH11 291 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 CLDN25C9JDP6 229 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 METTL18O95568 372 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 HDCP19113 662 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 IFITM2Q01629 132 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 KIZQ2M2Z5 673 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 ZNF534Q76KX8 674 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 KIAA2013Q8IYS2 634 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 C1orf127Q8N9H9 656 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 TWNKQ96RR1 684 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 GATA5Q9BWX5 397 aaPredicted RBP16.95■□□□□ 0.3
PMS1-213ENST00000441310 RAD21L1Q9H4I0 556 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 PCDHGA7Q9Y5G6 932 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 PRORSD1PA6NEY8 169 aa16.95■□□□□ 0.3
PMS1-213ENST00000441310 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.95■□□□□ 0.3
PMS1-213ENST00000441310 H3BRB1 525 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms