RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 AP1G1O43747 822 aa20.14■□□□□ 0.81
SHROOM1-204ENST00000440118 MIPP30301 263 aa20.14■□□□□ 0.81
SHROOM1-204ENST00000440118 CLDN2P57739 230 aa20.14■□□□□ 0.81
SHROOM1-204ENST00000440118 SHBQ15464 509 aa20.14■□□□□ 0.81
SHROOM1-204ENST00000440118 NFKBIBQ15653 356 aa20.14■□□□□ 0.81
SHROOM1-204ENST00000440118 ZSCAN23Q3MJ62 389 aa20.14■□□□□ 0.81
SHROOM1-204ENST00000440118 TMEM259Q4ZIN3 620 aa20.14■□□□□ 0.81
SHROOM1-204ENST00000440118 INO80DQ53TQ3 878 aaPredicted RBP20.14■□□□□ 0.81
SHROOM1-204ENST00000440118 RFX8Q6ZV50 586 aa20.14■□□□□ 0.81
SHROOM1-204ENST00000440118 NETO2Q8NC67 525 aa20.14■□□□□ 0.81
SHROOM1-204ENST00000440118 SLC17A9Q9BYT1 436 aa20.14■□□□□ 0.81
SHROOM1-204ENST00000440118 TRIM7Q9C029 511 aa20.14■□□□□ 0.81
SHROOM1-204ENST00000440118 KLC2Q9H0B6 622 aa20.14■□□□□ 0.81
SHROOM1-204ENST00000440118 SP110Q9HB58 689 aa20.14■□□□□ 0.81
SHROOM1-204ENST00000440118 IFNKQ9P0W0 207 aa20.14■□□□□ 0.81
SHROOM1-204ENST00000440118 DFFAO00273 331 aa20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 SERPING1P05155 500 aa20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 ABL2P42684 1182 aa20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 RXRGP48443 463 aa20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 NDST2P52849 883 aa20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 ZBED6P86452 979 aa20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 BNIP3Q12983 259 aa20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 CA9Q16790 459 aa20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 LRRC73Q5JTD7 316 aa20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 TTC7BQ86TV6 843 aa20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 GALNT15Q8N3T1 639 aa20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 OR13H1Q8NG92 308 aa20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 FAM174AQ8TBP5 190 aa20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 PEBP4Q96S96 227 aa20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 KCTD15Q96SI1 283 aaPredicted RBP20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 ZWILCHQ9H900 591 aa20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 TOR4AQ9NXH8 423 aa20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 IPO11Q9UI26 975 aaKnown RBP20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 ZMIZ1Q9ULJ6 1067 aa20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 ITM2BQ9Y287 266 aa20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 LUC7L2Q9Y383 392 aaKnown RBP20.13■□□□□ 0.81
SHROOM1-204ENST00000440118 FPGTO14772 594 aa20.12■□□□□ 0.81
SHROOM1-204ENST00000440118 LRCH4O75427 683 aa20.12■□□□□ 0.81
SHROOM1-204ENST00000440118 KRT37O76014 449 aa20.12■□□□□ 0.81
SHROOM1-204ENST00000440118 PAK4O96013 591 aaPredicted RBP20.12■□□□□ 0.81
SHROOM1-204ENST00000440118 ZNF135P52742 658 aaPredicted RBP20.12■□□□□ 0.81
SHROOM1-204ENST00000440118 GCNT7Q6ZNI0 430 aa20.12■□□□□ 0.81
SHROOM1-204ENST00000440118 PSTKQ8IV42 348 aaKnown RBP20.12■□□□□ 0.81
SHROOM1-204ENST00000440118 CXorf40AQ8TE69 158 aa20.12■□□□□ 0.81
SHROOM1-204ENST00000440118 SYN2Q92777 582 aaPredicted RBP20.12■□□□□ 0.81
SHROOM1-204ENST00000440118 TMEM121BQ9BXQ6 578 aaPredicted RBP20.12■□□□□ 0.81
SHROOM1-204ENST00000440118 PLXNB3Q9ULL4 1909 aa20.12■□□□□ 0.81
SHROOM1-204ENST00000440118 IGLON5A6NGN9 336 aa20.11■□□□□ 0.81
SHROOM1-204ENST00000440118 H3BRJ5 948 aa20.11■□□□□ 0.81
SHROOM1-204ENST00000440118 ARL4AP40617 200 aa20.11■□□□□ 0.81
SHROOM1-204ENST00000440118 SMTNL2Q2TAL5 461 aa20.11■□□□□ 0.81
SHROOM1-204ENST00000440118 SKOR2Q2VWA4 1001 aaPredicted RBP20.11■□□□□ 0.81
SHROOM1-204ENST00000440118 DHRS13Q6UX07 377 aa20.11■□□□□ 0.81
SHROOM1-204ENST00000440118 KYAT3Q6YP21 454 aaKnown RBP20.11■□□□□ 0.81
SHROOM1-204ENST00000440118 Q6ZSR6 202 aa20.11■□□□□ 0.81
SHROOM1-204ENST00000440118 KDF1Q8NAX2 398 aaPredicted RBP20.11■□□□□ 0.81
SHROOM1-204ENST00000440118 HSPH1Q92598 858 aa20.11■□□□□ 0.81
SHROOM1-204ENST00000440118 CINPQ9BW66 212 aaPredicted RBP20.11■□□□□ 0.81
SHROOM1-204ENST00000440118 C1QTNF7Q9BXJ2 289 aa20.11■□□□□ 0.81
SHROOM1-204ENST00000440118 ISCUQ9H1K1 167 aa20.11■□□□□ 0.81
SHROOM1-204ENST00000440118 LRRC19Q9H756 370 aa20.11■□□□□ 0.81
SHROOM1-204ENST00000440118 KLHL11Q9NVR0 708 aa20.11■□□□□ 0.81
SHROOM1-204ENST00000440118 DNAJC28Q9NX36 388 aa20.11■□□□□ 0.81
SHROOM1-204ENST00000440118 GGT7Q9UJ14 662 aa20.11■□□□□ 0.81
SHROOM1-204ENST00000440118 CAPN11Q9UMQ6 739 aa20.11■□□□□ 0.81
SHROOM1-204ENST00000440118 SHROOM3Q8TF72 1996 aa20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 FFAR2O15552 330 aa20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 PRAMEF11O60813 436 aa20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 RFPL3O75679 317 aa20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 PALMO75781 387 aa20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 PIGNO95427 931 aa20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 ERCC2P18074 760 aa20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 SSR1P43307 286 aaKnown RBP20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 RABIFP47224 123 aa20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 PAPOLAP51003 745 aaKnown RBP20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 DNAJC3Q13217 504 aa20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 GRM3Q14832 879 aa20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 ABI3BPQ7Z7G0 1075 aa20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 DCP2Q8IU60 420 aaKnown RBP20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 ARFGAP1Q8N6T3 406 aa20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 SLC39A8Q9C0K1 460 aa20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 LHX3Q9UBR4 397 aa20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 ANAPC7Q9UJX3 599 aa20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 HS3ST3A1Q9Y663 406 aa20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 SPEGQ15772 3267 aa20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 ARID1BQ8NFD5 2236 aaPredicted RBP20.1■□□□□ 0.81
SHROOM1-204ENST00000440118 FAM221BA6H8Z2 402 aa20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 H3BM21 787 aa20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 J3KR12 359 aa20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 ALPPL2P10696 532 aa20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 PCK1P35558 622 aa20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 HNF1BP35680 557 aa20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 PBX1P40424 430 aa20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 DAB2P98082 770 aa20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 ELP6Q0PNE2 266 aa20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 FGL2Q14314 439 aa20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 PIGHQ14442 188 aaPredicted RBP20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 ACAP1Q15027 740 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms