RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 DDIT4Q9NX09 232 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 DNMT3LQ9UJW3 386 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 IKBKGQ9Y6K9 419 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 BOD1L1Q8NFC6 3051 aa4.84□□□□□ -1.63
EDEM3-203ENST00000439962 PI4KAP42356 2102 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 SMIM23A6NLE4 172 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ERI2A8K979 691 aaKnown RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 NCAM2O15394 837 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 PAPSS1O43252 624 aaPredicted RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 MTSS1O43312 755 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 TULP3O75386 442 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 KRT38O76015 456 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 STC2O76061 302 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ALDH1A2O94788 518 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 SNUPNO95149 360 aaKnown RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 LTFP02788 710 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 SNRPAP09012 282 aaKnown RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ADH5P11766 374 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 CA4P22748 312 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 IL1R2P27930 398 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 SDC4P31431 198 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 HTR7P34969 479 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 HCAR3P49019 387 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 HARS2P49590 506 aaKnown RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 EPHA5P54756 1037 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 NHLH1Q02575 133 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 SEMA5AQ13591 1074 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 TRIP13Q15645 432 aaPredicted RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ZNF77Q15935 545 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 SEPT7Q16181 437 aaKnown RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 INSCQ1MX18 579 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 C15orf59Q2T9L4 293 aaPredicted RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 EML3Q32P44 896 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 DGKKQ5KSL6 1271 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 KAZNQ674X7 775 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ATG16L1Q676U5 607 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 RAP1GAP2Q684P5 730 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 CGB2Q6NT52 195 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 C3orf62Q6ZUJ4 267 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 SH2D5Q6ZV89 423 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 FAM183BPQ6ZVS7 135 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 BEND5Q7L4P6 421 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 FAM131BQ86XD5 332 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 DEFB106AQ8N104 65 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ARHGAP24Q8N264 748 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 CARNMT1Q8N4J0 409 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ENDOVQ8N8Q3 282 aaKnown RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 DTWD2Q8NBA8 298 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 LEMD2Q8NC56 503 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 FBXO36Q8NEA4 188 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 JOSD2Q8TAC2 188 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ZNF75CPQ92670 426 aaPredicted RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ATP2A3Q93084 1043 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 KLHL29Q96CT2 875 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 MYEOVQ96EZ4 313 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 FAM83CQ9BQN1 747 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 TMEM121Q9BTD3 319 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 TRIM62Q9BVG3 475 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 USP29Q9HBJ7 922 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 NOD2Q9HC29 1040 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 IGSF5Q9NSI5 407 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 GEMIN8Q9NWZ8 242 aaKnown RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 NOP53Q9NZM5 478 aaKnown RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 LSM7Q9UK45 103 aaKnown RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 SPAG17Q6Q759 2223 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 M0QYT0 321 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 FBXO21O94952 628 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 LUC7L3O95232 432 aaKnown RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 KLF8O95600 359 aaPredicted RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 MT-ND3P03897 115 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 INHBAP08476 426 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 PDGFRAP16234 1089 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 FOXN2P32314 431 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 HADHAP40939 763 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ETV4P43268 484 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 FCHO2Q0JRZ9 810 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 KRT81Q14533 505 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ACCSLQ4AC99 568 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 DARS2Q6PI48 645 aaKnown RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 KYAT3Q6YP21 454 aaKnown RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 MARK2Q7KZI7 788 aaKnown RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 CPA6Q8N4T0 437 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ZNF276Q8N554 614 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 FITM2Q8N6M3 262 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 PLD5Q8N7P1 536 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ZNF513Q8N8E2 541 aaPredicted RBP4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ANKRD42Q8N9B4 389 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 DEPDC1BQ8WUY9 529 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 RXFP2Q8WXD0 754 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 NXPE3Q969Y0 559 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 TTC17Q96AE7 1141 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 SPATA17Q96L03 361 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 MYRFLQ96LU7 910 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 TRIM55Q9BYV6 548 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 PCDH18Q9HCL0 1135 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 FSCN3Q9NQT6 498 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 ABCF3Q9NUQ8 709 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 KCNK4Q9NYG8 393 aa4.83□□□□□ -1.64
EDEM3-203ENST00000439962 MCM8Q9UJA3 840 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms