RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.96■□□□□ 0.952e-6■■■■■ 29
CHD3-204ENST00000439235 TADA1Q96BN2 335 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 FSD1LQ9BXM9 530 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 FOXP3Q9BZS1 431 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 NOD2Q9HC29 1040 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 UBP1Q9NZI7 540 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 WNT16Q9UBV4 365 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 FBXL21Q9UKT6 434 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 RAB21Q9UL25 225 aa20.96■□□□□ 0.95
CHD3-204ENST00000439235 MUC22E2RYF6 1773 aaPredicted RBP20.95■□□□□ 0.94
CHD3-204ENST00000439235 EYSQ5T1H1 3165 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 EDDM13A0A1B0GTR0 161 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 K7EQS6 105 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 PMPCBO75439 489 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 TMEM63AO94886 807 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 SUN1O94901 812 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 EGFP01133 1207 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 VSNL1P62760 191 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 HNRNPA1L2Q32P51 320 aaKnown RBP20.95■□□□□ 0.94
CHD3-204ENST00000439235 IER5LQ5T953 404 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 ANKRD22Q5VYY1 191 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 KCTD11Q693B1 232 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 KDELC1Q6UW63 502 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 TRMT11Q7Z4G4 463 aaKnown RBP20.95■□□□□ 0.94
CHD3-204ENST00000439235 LINC00523Q86TU6 105 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 MCUQ8NE86 351 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 IPMKQ8NFU5 416 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 FBXO25Q8TCJ0 367 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 SHDQ96IW2 340 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 TUBGCP5Q96RT8 1024 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 TMEM245Q9H330 911 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 ZDHHC18Q9NUE0 388 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 EVLQ9UI08 416 aaPredicted RBP20.95■□□□□ 0.94
CHD3-204ENST00000439235 CA14Q9ULX7 337 aa20.95■□□□□ 0.94
CHD3-204ENST00000439235 MIA3Q5JRA6 1907 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 UQCRHLA0A096LP55 91 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 TCRBV7S3A2A0A539 114 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 TTC24A2A3L6 582 aaPredicted RBP20.94■□□□□ 0.94
CHD3-204ENST00000439235 AP3B1O00203 1094 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 BNIP3LO60238 219 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 GJB3O75712 270 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 POP4O95707 220 aaKnown RBP20.94■□□□□ 0.94
CHD3-204ENST00000439235 UQCRHP07919 91 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 IL12RB1P42701 662 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 KIR2DL1P43626 348 aaPredicted RBP20.94■□□□□ 0.94
CHD3-204ENST00000439235 CCNHP51946 323 aaPredicted RBP20.94■□□□□ 0.94
CHD3-204ENST00000439235 SEC13P55735 322 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 WNT3AP56704 352 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 MYLK3Q32MK0 819 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 SYCP2LQ5T4T6 812 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 CCNI2Q6ZMN8 369 aaPredicted RBP20.94■□□□□ 0.94
CHD3-204ENST00000439235 CEP128Q6ZU80 1094 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 CHPFQ8IZ52 775 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 GJD3Q8N144 294 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 ZCCHC9Q8N567 271 aaKnown RBP20.94■□□□□ 0.94
CHD3-204ENST00000439235 EZH1Q92800 747 aaPredicted RBP20.94■□□□□ 0.94
CHD3-204ENST00000439235 FMO2Q99518 471 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 TBL1YQ9BQ87 522 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 FICDQ9BVA6 458 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 TSPYL1Q9H0U9 437 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 ATP13A3Q9H7F0 1226 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 HECAQ9UBI9 543 aaPredicted RBP20.94■□□□□ 0.94
CHD3-204ENST00000439235 SUN2Q9UH99 717 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 NFU1Q9UMS0 254 aa20.94■□□□□ 0.94
CHD3-204ENST00000439235 MRPS17Q9Y2R5 130 aaKnown RBP20.94■□□□□ 0.94
CHD3-204ENST00000439235 SPTBN5Q9NRC6 3674 aaKnown RBP20.93■□□□□ 0.94
CHD3-204ENST00000439235 WASH3PC4AMC7 463 aa20.93■□□□□ 0.94
CHD3-204ENST00000439235 TP73O15350 636 aa20.93■□□□□ 0.94
CHD3-204ENST00000439235 SOCS5O75159 536 aa20.93■□□□□ 0.94
CHD3-204ENST00000439235 TIE1P35590 1138 aa20.93■□□□□ 0.94
CHD3-204ENST00000439235 MRPS21P82921 87 aaKnown RBP20.93■□□□□ 0.94
CHD3-204ENST00000439235 BCL2L1Q07817 233 aa20.93■□□□□ 0.94
CHD3-204ENST00000439235 ENPP2Q13822 863 aa20.93■□□□□ 0.94
CHD3-204ENST00000439235 PCSK7Q16549 785 aa20.93■□□□□ 0.94
CHD3-204ENST00000439235 SDE2Q6IQ49 451 aa20.93■□□□□ 0.94
CHD3-204ENST00000439235 DPY19L3Q6ZPD9 716 aa20.93■□□□□ 0.94
CHD3-204ENST00000439235 OR2A12Q8NGT7 310 aa20.93■□□□□ 0.94
CHD3-204ENST00000439235 OR6K2Q8NGY2 324 aa20.93■□□□□ 0.94
CHD3-204ENST00000439235 IFT43Q96FT9 208 aa20.93■□□□□ 0.94
CHD3-204ENST00000439235 FEM1CQ96JP0 617 aa20.93■□□□□ 0.94
CHD3-204ENST00000439235 MRGPRX2Q96LB1 330 aa20.93■□□□□ 0.94
CHD3-204ENST00000439235 HEPHQ9BQS7 1158 aa20.93■□□□□ 0.94
CHD3-204ENST00000439235 XAB2Q9HCS7 855 aaKnown RBP20.93■□□□□ 0.94
CHD3-204ENST00000439235 CACNA2D2Q9NY47 1150 aa20.93■□□□□ 0.94
CHD3-204ENST00000439235 HCN2Q9UL51 889 aa20.93■□□□□ 0.94
CHD3-204ENST00000439235 ARIH1Q9Y4X5 557 aaPredicted RBP20.93■□□□□ 0.94
CHD3-204ENST00000439235 STON1Q9Y6Q2 735 aa20.93■□□□□ 0.94
CHD3-204ENST00000439235 SHISA7A6NL88 538 aa20.92■□□□□ 0.94
CHD3-204ENST00000439235 GOLGA8MH3BSY2 632 aa20.92■□□□□ 0.94
CHD3-204ENST00000439235 PPFIA2O75334 1257 aa20.92■□□□□ 0.94
CHD3-204ENST00000439235 EPOP01588 193 aa20.92■□□□□ 0.94
CHD3-204ENST00000439235 MLNP12872 115 aa20.92■□□□□ 0.94
CHD3-204ENST00000439235 PRKCHP24723 683 aa20.92■□□□□ 0.94
CHD3-204ENST00000439235 SERPINA4P29622 427 aa20.92■□□□□ 0.94
CHD3-204ENST00000439235 ECHS1P30084 290 aa20.92■□□□□ 0.94
CHD3-204ENST00000439235 ARL4CP56559 192 aa20.92■□□□□ 0.94
CHD3-204ENST00000439235 MAP9Q49MG5 647 aa20.92■□□□□ 0.94
CHD3-204ENST00000439235 HSF5Q4G112 596 aaPredicted RBP20.92■□□□□ 0.94
CHD3-204ENST00000439235 EMC10Q5UCC4 262 aa20.92■□□□□ 0.94
CHD3-204ENST00000439235 ZNF366Q8N895 744 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms